Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 14 curated entries in PaperBLAST's database that match '1.2.1.41' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_0508: gamma-glutamyl phosphate reductase
is similar to:
PaperBLAST

PROA_ECOLI / P07004: Gamma-glutamyl phosphate reductase; GPR; Glutamate-5-semialdehyde dehydrogenase; Glutamyl-gamma-semialdehyde dehydrogenase; GSA dehydrogenase; EC 1.2.1.41 from Escherichia coli
ProA / b0243: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) from Escherichia coli
proA / P07004: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) from Escherichia coli

46% id,
100% cov

A7Y114: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) from Halobacillus halophilus

47% id,
96% cov

Echvi_2633: gamma-glutamylphosphate reductase (EC 1.2.1.41) from Echinicola vietnamensis

38% id,
99% cov

More...

Psest_3384: glutamate 5-kinase
is similar to:
PaperBLAST

P5CS1_ORYSJ / O04226: Delta-1-pyrroline-5-carboxylate synthase 1; OsP5CS1; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa

30% id,
53% cov

P5CS2_ORYSJ / Q941T1: Delta-1-pyrroline-5-carboxylate synthase 2; OsP5CS2; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa
Q941T1: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) from Oryza sativa

32% id,
41% cov

P5CS_HUMAN / P54886: Delta-1-pyrroline-5-carboxylate synthase; P5CS; Aldehyde dehydrogenase family 18 member A1; EC 2.7.2.11; EC 1.2.1.41 from Homo sapiens
ALDH18A1 / P54886: δ-1-pyrroline-5-carboxylate synthase (EC 1.2.1.41; EC 2.7.2.11) from Homo sapiens

34% id,
37% cov

More...

Psest_0270: carbamate kinase
is similar to:
PaperBLAST

P5CS1 / P54887: δ1-pyrroline-5-carboxylate synthetase (EC 1.2.1.41; EC 2.7.2.11) from Arabidopsis thaliana

34% id,
15% cov

P5CS1_ORYSJ / O04226: Delta-1-pyrroline-5-carboxylate synthase 1; OsP5CS1; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa

36% id,
14% cov

P5CS2_ORYSJ / Q941T1: Delta-1-pyrroline-5-carboxylate synthase 2; OsP5CS2; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa
Q941T1: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) from Oryza sativa

36% id,
14% cov

Psest_2840: uridylate kinase
is similar to:
PaperBLAST

P5CS1 / P54887: δ1-pyrroline-5-carboxylate synthetase (EC 1.2.1.41; EC 2.7.2.11) from Arabidopsis thaliana

36% id,
10% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory