Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 4 curated entries in PaperBLAST's database that match '1.2.1.85' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_0905: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

praB / C4TP02: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Paenibacillus sp.

44% id,
97% cov

Q1XGK8: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Pseudomonas putida

41% id,
99% cov

XYLG_PSEPU / P23105: 2-hydroxymuconic semialdehyde dehydrogenase; HMSD; EC 1.2.1.85 from Pseudomonas putida
xylG / P23105: 2-hydroxymuconate semialdehyde dehydrogenase subunit (EC 1.2.1.85) from Pseudomonas putida

39% id,
99% cov

Psest_4305: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

praB / C4TP02: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Paenibacillus sp.

42% id,
100% cov

Q1XGK8: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Pseudomonas putida

39% id,
100% cov

XYLG_PSEPU / P23105: 2-hydroxymuconic semialdehyde dehydrogenase; HMSD; EC 1.2.1.85 from Pseudomonas putida
xylG / P23105: 2-hydroxymuconate semialdehyde dehydrogenase subunit (EC 1.2.1.85) from Pseudomonas putida

38% id,
100% cov

Psest_2634: glycine betaine aldehyde dehydrogenase
is similar to:
PaperBLAST

praB / C4TP02: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Paenibacillus sp.

41% id,
97% cov

Q1XGK8: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Pseudomonas putida

40% id,
99% cov

XYLG_PSEPU / P23105: 2-hydroxymuconic semialdehyde dehydrogenase; HMSD; EC 1.2.1.85 from Pseudomonas putida
xylG / P23105: 2-hydroxymuconate semialdehyde dehydrogenase subunit (EC 1.2.1.85) from Pseudomonas putida

38% id,
99% cov

Psest_0671: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

praB / C4TP02: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Paenibacillus sp.

41% id,
97% cov

XYLG_PSEPU / P23105: 2-hydroxymuconic semialdehyde dehydrogenase; HMSD; EC 1.2.1.85 from Pseudomonas putida
xylG / P23105: 2-hydroxymuconate semialdehyde dehydrogenase subunit (EC 1.2.1.85) from Pseudomonas putida

37% id,
99% cov

Q1XGK8: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Pseudomonas putida

37% id,
99% cov

Psest_2276: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

praB / C4TP02: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Paenibacillus sp.

41% id,
97% cov

Q1XGK8: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Pseudomonas putida

37% id,
99% cov

XYLG_PSEPU / P23105: 2-hydroxymuconic semialdehyde dehydrogenase; HMSD; EC 1.2.1.85 from Pseudomonas putida
xylG / P23105: 2-hydroxymuconate semialdehyde dehydrogenase subunit (EC 1.2.1.85) from Pseudomonas putida

36% id,
99% cov

Psest_4237: succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

praB / C4TP02: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Paenibacillus sp.

38% id,
97% cov

Q1XGK8: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Pseudomonas putida

35% id,
99% cov

XYLG_PSEPU / P23105: 2-hydroxymuconic semialdehyde dehydrogenase; HMSD; EC 1.2.1.85 from Pseudomonas putida
xylG / P23105: 2-hydroxymuconate semialdehyde dehydrogenase subunit (EC 1.2.1.85) from Pseudomonas putida

34% id,
99% cov

Psest_3654: succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

praB / C4TP02: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Paenibacillus sp.

37% id,
97% cov

XYLG_PSEPU / P23105: 2-hydroxymuconic semialdehyde dehydrogenase; HMSD; EC 1.2.1.85 from Pseudomonas putida
xylG / P23105: 2-hydroxymuconate semialdehyde dehydrogenase subunit (EC 1.2.1.85) from Pseudomonas putida

36% id,
98% cov

Q1XGK8: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Pseudomonas putida

35% id,
98% cov

Psest_0375: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

praB / C4TP02: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Paenibacillus sp.

37% id,
97% cov

XYLG_PSEPU / P23105: 2-hydroxymuconic semialdehyde dehydrogenase; HMSD; EC 1.2.1.85 from Pseudomonas putida
xylG / P23105: 2-hydroxymuconate semialdehyde dehydrogenase subunit (EC 1.2.1.85) from Pseudomonas putida

34% id,
100% cov

Q1XGK8: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Pseudomonas putida

33% id,
100% cov

Psest_2436: methylmalonic acid semialdehyde dehydrogenase
is similar to:
PaperBLAST

praB / C4TP02: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Paenibacillus sp.

33% id,
97% cov

XYLG_PSEPU / P23105: 2-hydroxymuconic semialdehyde dehydrogenase; HMSD; EC 1.2.1.85 from Pseudomonas putida
xylG / P23105: 2-hydroxymuconate semialdehyde dehydrogenase subunit (EC 1.2.1.85) from Pseudomonas putida

32% id,
99% cov

Q1XGK8: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Pseudomonas putida

32% id,
99% cov

Psest_3781: methylmalonic acid semialdehyde dehydrogenase
is similar to:
PaperBLAST

Q1XGK8: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Pseudomonas putida

30% id,
99% cov

praB / C4TP02: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Paenibacillus sp.

29% id,
93% cov

Psest_3079: delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)
is similar to:
PaperBLAST

Q1XGK8: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Pseudomonas putida

30% id,
95% cov

praB / C4TP02: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Paenibacillus sp.

29% id,
91% cov

XYLG_PSEPU / P23105: 2-hydroxymuconic semialdehyde dehydrogenase; HMSD; EC 1.2.1.85 from Pseudomonas putida
xylG / P23105: 2-hydroxymuconate semialdehyde dehydrogenase subunit (EC 1.2.1.85) from Pseudomonas putida

28% id,
93% cov

Psest_0855: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

Q1XGK8: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Pseudomonas putida

27% id,
95% cov

praB / C4TP02: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Paenibacillus sp.

27% id,
87% cov

Psest_0247: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

Q1XGK8: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Pseudomonas putida

32% id,
71% cov

praB / C4TP02: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Paenibacillus sp.

31% id,
71% cov

XYLG_PSEPU / P23105: 2-hydroxymuconic semialdehyde dehydrogenase; HMSD; EC 1.2.1.85 from Pseudomonas putida
xylG / P23105: 2-hydroxymuconate semialdehyde dehydrogenase subunit (EC 1.2.1.85) from Pseudomonas putida

31% id,
71% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory