Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 57 curated entries in PaperBLAST's database that match '2.3.1.29'.

These curated entries have 39 distinct sequences.

Running ublast with E ≤ 0.01

Found 14 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_0412: 8-amino-7-oxononanoate synthase
is similar to:
PaperBLAST

BIKB_THET8 / Q5SHZ8: 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase; AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; Glycine acetyltransferase; EC 2.3.1.29; EC 2.3.1.47 from Thermus thermophilus

42% id,
97% cov

Shewana3_4104: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) from Shewanella sp.

37% id,
96% cov

PGA1_c34330: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) from Phaeobacter inhibens

37% id,
96% cov

More...

Psest_1690: beta-ketoacyl-acyl-carrier-protein synthase II
is similar to:
PaperBLAST

KASA_MYCTE / H8ESN0: 3-oxoacyl-[acyl-carrier-protein] synthase 1; Beta-ketoacyl-ACP synthase 1; KAS 1; EC 2.3.1.293 from Mycobacterium tuberculosis
KASA_MYCTU / P9WQD9: 3-oxoacyl-[acyl-carrier-protein] synthase 1; Beta-ketoacyl-ACP synthase 1; KAS 1; Beta-ketoacyl-acyl carrier protein synthase KasA; Meromycolic acid 3-oxoacyl-(acyl carrier protein) synthase I; EC 2.3.1.293 from Mycobacterium tuberculosis
kasA / P9WQD9: meromycolic acid 3-oxoacyl-(acyl carrier protein) synthase I monomer (EC 2.3.1.41; EC 2.3.1.179; EC 2.3.1.293) from Mycobacterium tuberculosis

39% id,
97% cov

KASB_MYCTU / P9WQD7: 3-oxoacyl-[acyl-carrier-protein] synthase 2; Beta-ketoacyl-ACP synthase 2; KAS 2; Beta-ketoacyl-acyl carrier protein synthase KasB; Meromycolic acid 3-oxoacyl-(acyl carrier protein) synthase II; EC 2.3.1.294 from Mycobacterium tuberculosis
kasB / P9WQD7: meromycolic acid 3-oxoacyl-(acyl carrier protein) synthase II (EC 2.3.1.294) from Mycobacterium tuberculosis

37% id,
97% cov

PPSB_MYCTU / P9WQE5: Phenolphthiocerol/phthiocerol polyketide synthase subunit B; (Phenol)carboxyphthiodiolenone synthase subunit B; Beta-ketoacyl-acyl-carrier-protein synthase I; Phthiocerol synthesis polyketide synthase type I PpsB; EC 2.3.1.292 from Mycobacterium tuberculosis

27% id,
28% cov

More...

Psest_3704: 3-oxoacyl-(acyl-carrier-protein) synthase
is similar to:
PaperBLAST

KASB_MYCTU / P9WQD7: 3-oxoacyl-[acyl-carrier-protein] synthase 2; Beta-ketoacyl-ACP synthase 2; KAS 2; Beta-ketoacyl-acyl carrier protein synthase KasB; Meromycolic acid 3-oxoacyl-(acyl carrier protein) synthase II; EC 2.3.1.294 from Mycobacterium tuberculosis
kasB / P9WQD7: meromycolic acid 3-oxoacyl-(acyl carrier protein) synthase II (EC 2.3.1.294) from Mycobacterium tuberculosis

35% id,
97% cov

KASA_MYCTE / H8ESN0: 3-oxoacyl-[acyl-carrier-protein] synthase 1; Beta-ketoacyl-ACP synthase 1; KAS 1; EC 2.3.1.293 from Mycobacterium tuberculosis
KASA_MYCTU / P9WQD9: 3-oxoacyl-[acyl-carrier-protein] synthase 1; Beta-ketoacyl-ACP synthase 1; KAS 1; Beta-ketoacyl-acyl carrier protein synthase KasA; Meromycolic acid 3-oxoacyl-(acyl carrier protein) synthase I; EC 2.3.1.293 from Mycobacterium tuberculosis
kasA / P9WQD9: meromycolic acid 3-oxoacyl-(acyl carrier protein) synthase I monomer (EC 2.3.1.41; EC 2.3.1.179; EC 2.3.1.293) from Mycobacterium tuberculosis

34% id,
97% cov

PPSB_MYCTU / P9WQE5: Phenolphthiocerol/phthiocerol polyketide synthase subunit B; (Phenol)carboxyphthiodiolenone synthase subunit B; Beta-ketoacyl-acyl-carrier-protein synthase I; Phthiocerol synthesis polyketide synthase type I PpsB; EC 2.3.1.292 from Mycobacterium tuberculosis

27% id,
21% cov

More...

Psest_2473: 3-oxoacyl-(acyl-carrier-protein) synthase
is similar to:
PaperBLAST

KASB_MYCTU / P9WQD7: 3-oxoacyl-[acyl-carrier-protein] synthase 2; Beta-ketoacyl-ACP synthase 2; KAS 2; Beta-ketoacyl-acyl carrier protein synthase KasB; Meromycolic acid 3-oxoacyl-(acyl carrier protein) synthase II; EC 2.3.1.294 from Mycobacterium tuberculosis
kasB / P9WQD7: meromycolic acid 3-oxoacyl-(acyl carrier protein) synthase II (EC 2.3.1.294) from Mycobacterium tuberculosis

31% id,
97% cov

KASA_MYCTE / H8ESN0: 3-oxoacyl-[acyl-carrier-protein] synthase 1; Beta-ketoacyl-ACP synthase 1; KAS 1; EC 2.3.1.293 from Mycobacterium tuberculosis
KASA_MYCTU / P9WQD9: 3-oxoacyl-[acyl-carrier-protein] synthase 1; Beta-ketoacyl-ACP synthase 1; KAS 1; Beta-ketoacyl-acyl carrier protein synthase KasA; Meromycolic acid 3-oxoacyl-(acyl carrier protein) synthase I; EC 2.3.1.293 from Mycobacterium tuberculosis
kasA / P9WQD9: meromycolic acid 3-oxoacyl-(acyl carrier protein) synthase I monomer (EC 2.3.1.41; EC 2.3.1.179; EC 2.3.1.293) from Mycobacterium tuberculosis

31% id,
97% cov

PPSC_MYCBO / Q7TXL8: Phenolphthiocerol/phthiocerol polyketide synthase subunit C; (Phenol)carboxyphthiodiolenone synthase subunit C; Beta-ketoacyl-acyl-carrier-protein synthase I; Phthiocerol synthesis polyketide synthase type I PpsC; EC 2.3.1.292 from Mycobacterium bovis
PPSC_MYCTU / P96202: Phenolphthiocerol/phthiocerol polyketide synthase subunit C; (Phenol)carboxyphthiodiolenone synthase subunit C; Beta-ketoacyl-acyl-carrier-protein synthase I; Phthiocerol synthesis polyketide synthase type I PpsC; EC 2.3.1.292 from Mycobacterium tuberculosis

25% id,
15% cov

Psest_3701: 3-oxoacyl-(acyl-carrier-protein) synthase
is similar to:
PaperBLAST

KASA_MYCTE / H8ESN0: 3-oxoacyl-[acyl-carrier-protein] synthase 1; Beta-ketoacyl-ACP synthase 1; KAS 1; EC 2.3.1.293 from Mycobacterium tuberculosis
KASA_MYCTU / P9WQD9: 3-oxoacyl-[acyl-carrier-protein] synthase 1; Beta-ketoacyl-ACP synthase 1; KAS 1; Beta-ketoacyl-acyl carrier protein synthase KasA; Meromycolic acid 3-oxoacyl-(acyl carrier protein) synthase I; EC 2.3.1.293 from Mycobacterium tuberculosis
kasA / P9WQD9: meromycolic acid 3-oxoacyl-(acyl carrier protein) synthase I monomer (EC 2.3.1.41; EC 2.3.1.179; EC 2.3.1.293) from Mycobacterium tuberculosis

34% id,
74% cov

KASB_MYCTU / P9WQD7: 3-oxoacyl-[acyl-carrier-protein] synthase 2; Beta-ketoacyl-ACP synthase 2; KAS 2; Beta-ketoacyl-acyl carrier protein synthase KasB; Meromycolic acid 3-oxoacyl-(acyl carrier protein) synthase II; EC 2.3.1.294 from Mycobacterium tuberculosis
kasB / P9WQD7: meromycolic acid 3-oxoacyl-(acyl carrier protein) synthase II (EC 2.3.1.294) from Mycobacterium tuberculosis

33% id,
61% cov

PPSD_MYCTU / P9WQE3: Phenolphthiocerol/phthiocerol polyketide synthase subunit D; (Phenol)carboxyphthiodiolenone synthase subunit D; Beta-ketoacyl-acyl-carrier-protein synthase I; Phthiocerol synthesis polyketide synthase type I PpsD; EC 2.3.1.292 from Mycobacterium tuberculosis

28% id,
19% cov

More...

Psest_0108: malonate decarboxylase, epsilon subunit
is similar to:
PaperBLAST

PPSB_MYCTU / P9WQE5: Phenolphthiocerol/phthiocerol polyketide synthase subunit B; (Phenol)carboxyphthiodiolenone synthase subunit B; Beta-ketoacyl-acyl-carrier-protein synthase I; Phthiocerol synthesis polyketide synthase type I PpsB; EC 2.3.1.292 from Mycobacterium tuberculosis

31% id,
17% cov

PPSB_MYCBO / Q7TXL9: Phenolphthiocerol/phthiocerol polyketide synthase subunit B; (Phenol)carboxyphthiodiolenone synthase subunit B; Beta-ketoacyl-acyl-carrier-protein synthase I; Phthiocerol synthesis polyketide synthase type I PpsB; EC 2.3.1.292 from Mycobacterium bovis

31% id,
17% cov

PPSA_MYCTU / P9WQE7: Phenolphthiocerol/phthiocerol polyketide synthase subunit A; (Phenol)carboxyphthiodiolenone synthase subunit A; Beta-ketoacyl-acyl-carrier-protein synthase I; Phthiocerol synthesis polyketide synthase type I PpsA; EC 2.3.1.292 from Mycobacterium tuberculosis

30% id,
16% cov

More...

Psest_1687: malonyl CoA-acyl carrier protein transacylase
is similar to:
PaperBLAST

PPSB_MYCTU / P9WQE5: Phenolphthiocerol/phthiocerol polyketide synthase subunit B; (Phenol)carboxyphthiodiolenone synthase subunit B; Beta-ketoacyl-acyl-carrier-protein synthase I; Phthiocerol synthesis polyketide synthase type I PpsB; EC 2.3.1.292 from Mycobacterium tuberculosis

30% id,
17% cov

PPSB_MYCBO / Q7TXL9: Phenolphthiocerol/phthiocerol polyketide synthase subunit B; (Phenol)carboxyphthiodiolenone synthase subunit B; Beta-ketoacyl-acyl-carrier-protein synthase I; Phthiocerol synthesis polyketide synthase type I PpsB; EC 2.3.1.292 from Mycobacterium bovis

30% id,
17% cov

PPSD_MYCTU / P9WQE3: Phenolphthiocerol/phthiocerol polyketide synthase subunit D; (Phenol)carboxyphthiodiolenone synthase subunit D; Beta-ketoacyl-acyl-carrier-protein synthase I; Phthiocerol synthesis polyketide synthase type I PpsD; EC 2.3.1.292 from Mycobacterium tuberculosis

32% id,
15% cov

More...

Psest_0166: NADPH:quinone reductase and related Zn-dependent oxidoreductases
is similar to:
PaperBLAST

PPSC_MYCBO / Q7TXL8: Phenolphthiocerol/phthiocerol polyketide synthase subunit C; (Phenol)carboxyphthiodiolenone synthase subunit C; Beta-ketoacyl-acyl-carrier-protein synthase I; Phthiocerol synthesis polyketide synthase type I PpsC; EC 2.3.1.292 from Mycobacterium bovis
PPSC_MYCTU / P96202: Phenolphthiocerol/phthiocerol polyketide synthase subunit C; (Phenol)carboxyphthiodiolenone synthase subunit C; Beta-ketoacyl-acyl-carrier-protein synthase I; Phthiocerol synthesis polyketide synthase type I PpsC; EC 2.3.1.292 from Mycobacterium tuberculosis

32% id,
14% cov

PKS12_MYCTU / I6XD69: Mycoketide-CoA synthase; Polyketide synthase Pks12; EC 2.3.1.295 from Mycobacterium tuberculosis
pks12 / I6XD69: mycoketide-CoA synthase monomer (EC 2.3.1.295) from Mycobacterium tuberculosis

29% id,
7% cov

Psest_2147: NADPH:quinone reductase and related Zn-dependent oxidoreductases
is similar to:
PaperBLAST

PPSC_MYCBO / Q7TXL8: Phenolphthiocerol/phthiocerol polyketide synthase subunit C; (Phenol)carboxyphthiodiolenone synthase subunit C; Beta-ketoacyl-acyl-carrier-protein synthase I; Phthiocerol synthesis polyketide synthase type I PpsC; EC 2.3.1.292 from Mycobacterium bovis
PPSC_MYCTU / P96202: Phenolphthiocerol/phthiocerol polyketide synthase subunit C; (Phenol)carboxyphthiodiolenone synthase subunit C; Beta-ketoacyl-acyl-carrier-protein synthase I; Phthiocerol synthesis polyketide synthase type I PpsC; EC 2.3.1.292 from Mycobacterium tuberculosis

30% id,
15% cov

PKS12_MYCTU / I6XD69: Mycoketide-CoA synthase; Polyketide synthase Pks12; EC 2.3.1.295 from Mycobacterium tuberculosis
pks12 / I6XD69: mycoketide-CoA synthase monomer (EC 2.3.1.295) from Mycobacterium tuberculosis

32% id,
5% cov

Psest_2950: putative NAD(P)H quinone oxidoreductase, PIG3 family
is similar to:
PaperBLAST

PPSC_MYCBO / Q7TXL8: Phenolphthiocerol/phthiocerol polyketide synthase subunit C; (Phenol)carboxyphthiodiolenone synthase subunit C; Beta-ketoacyl-acyl-carrier-protein synthase I; Phthiocerol synthesis polyketide synthase type I PpsC; EC 2.3.1.292 from Mycobacterium bovis
PPSC_MYCTU / P96202: Phenolphthiocerol/phthiocerol polyketide synthase subunit C; (Phenol)carboxyphthiodiolenone synthase subunit C; Beta-ketoacyl-acyl-carrier-protein synthase I; Phthiocerol synthesis polyketide synthase type I PpsC; EC 2.3.1.292 from Mycobacterium tuberculosis

30% id,
13% cov

PKS12_MYCTU / I6XD69: Mycoketide-CoA synthase; Polyketide synthase Pks12; EC 2.3.1.295 from Mycobacterium tuberculosis
pks12 / I6XD69: mycoketide-CoA synthase monomer (EC 2.3.1.295) from Mycobacterium tuberculosis

28% id,
7% cov

Psest_0490: Threonine dehydrogenase and related Zn-dependent dehydrogenases
is similar to:
PaperBLAST

PPSC_MYCBO / Q7TXL8: Phenolphthiocerol/phthiocerol polyketide synthase subunit C; (Phenol)carboxyphthiodiolenone synthase subunit C; Beta-ketoacyl-acyl-carrier-protein synthase I; Phthiocerol synthesis polyketide synthase type I PpsC; EC 2.3.1.292 from Mycobacterium bovis
PPSC_MYCTU / P96202: Phenolphthiocerol/phthiocerol polyketide synthase subunit C; (Phenol)carboxyphthiodiolenone synthase subunit C; Beta-ketoacyl-acyl-carrier-protein synthase I; Phthiocerol synthesis polyketide synthase type I PpsC; EC 2.3.1.292 from Mycobacterium tuberculosis

26% id,
14% cov

Psest_2358: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

PPSB_MYCTU / P9WQE5: Phenolphthiocerol/phthiocerol polyketide synthase subunit B; (Phenol)carboxyphthiodiolenone synthase subunit B; Beta-ketoacyl-acyl-carrier-protein synthase I; Phthiocerol synthesis polyketide synthase type I PpsB; EC 2.3.1.292 from Mycobacterium tuberculosis

25% id,
14% cov

PPSB_MYCBO / Q7TXL9: Phenolphthiocerol/phthiocerol polyketide synthase subunit B; (Phenol)carboxyphthiodiolenone synthase subunit B; Beta-ketoacyl-acyl-carrier-protein synthase I; Phthiocerol synthesis polyketide synthase type I PpsB; EC 2.3.1.292 from Mycobacterium bovis

24% id,
14% cov

Psest_1434: NADPH:quinone reductase and related Zn-dependent oxidoreductases
is similar to:
PaperBLAST

PKS12_MYCTU / I6XD69: Mycoketide-CoA synthase; Polyketide synthase Pks12; EC 2.3.1.295 from Mycobacterium tuberculosis
pks12 / I6XD69: mycoketide-CoA synthase monomer (EC 2.3.1.295) from Mycobacterium tuberculosis

31% id,
8% cov

Psest_1076: acetyl-CoA acetyltransferases
is similar to:
PaperBLAST

PKS12_MYCTU / I6XD69: Mycoketide-CoA synthase; Polyketide synthase Pks12; EC 2.3.1.295 from Mycobacterium tuberculosis
pks12 / I6XD69: mycoketide-CoA synthase monomer (EC 2.3.1.295) from Mycobacterium tuberculosis

26% id,
3% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1797574-1798920 (frame +1) on Psest_Contig47.1
is similar to:
PaperBLAST

KASA_MYCTE / H8ESN0: 3-oxoacyl-[acyl-carrier-protein] synthase 1; Beta-ketoacyl-ACP synthase 1; KAS 1; EC 2.3.1.293 from Mycobacterium tuberculosis
KASA_MYCTU / P9WQD9: 3-oxoacyl-[acyl-carrier-protein] synthase 1; Beta-ketoacyl-ACP synthase 1; KAS 1; Beta-ketoacyl-acyl carrier protein synthase KasA; Meromycolic acid 3-oxoacyl-(acyl carrier protein) synthase I; EC 2.3.1.293 from Mycobacterium tuberculosis
kasA / P9WQD9: meromycolic acid 3-oxoacyl-(acyl carrier protein) synthase I monomer (EC 2.3.1.41; EC 2.3.1.179; EC 2.3.1.293) from Mycobacterium tuberculosis
Also see hits to annotated proteins above

38% id,
100% cov

PPSB_MYCTU / P9WQE5: Phenolphthiocerol/phthiocerol polyketide synthase subunit B; (Phenol)carboxyphthiodiolenone synthase subunit B; Beta-ketoacyl-acyl-carrier-protein synthase I; Phthiocerol synthesis polyketide synthase type I PpsB; EC 2.3.1.292 from Mycobacterium tuberculosis
Also see hits to annotated proteins above

27% id,
28% cov

PPSB_MYCBO / Q7TXL9: Phenolphthiocerol/phthiocerol polyketide synthase subunit B; (Phenol)carboxyphthiodiolenone synthase subunit B; Beta-ketoacyl-acyl-carrier-protein synthase I; Phthiocerol synthesis polyketide synthase type I PpsB; EC 2.3.1.292 from Mycobacterium bovis
Also see hits to annotated proteins above

27% id,
28% cov

3146586-3147563 (frame -2) on Psest_Contig47.1
is similar to:
PaperBLAST

PKS12_MYCTU / I6XD69: Mycoketide-CoA synthase; Polyketide synthase Pks12; EC 2.3.1.295 from Mycobacterium tuberculosis
pks12 / I6XD69: mycoketide-CoA synthase monomer (EC 2.3.1.295) from Mycobacterium tuberculosis
Also see hits to annotated proteins above

29% id,
7% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory