Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 77 curated entries in PaperBLAST's database that match '2.3.1.31' as complete word(s).

These curated entries have 68 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_0280: homoserine O-acetyltransferase
is similar to:
PaperBLAST

METXA_LEPIN / Q8F4I0: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Leptospira interrogans

48% id,
98% cov

METXA_CAUVC / Q9AAS1: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Caulobacter vibrioides

51% id,
92% cov

metX / GB|CAA71733.1: homoserine O-acetyltransferase; EC 2.3.1.31 from Leptospira meyeri
metX / P94891: homoserine O-acetyltransferase (EC 2.3.1.31) from Leptospira meyeri
P94891: homoserine O-acetyltransferase (EC 2.3.1.31) from Leptospira meyeri

48% id,
98% cov

More...

Psest_2366: Homoserine acetyltransferase
is similar to:
PaperBLAST

METXA_CAUVC / Q9AAS1: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Caulobacter vibrioides

30% id,
89% cov

METXA_SOLM1 / C4XNQ9: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Solidesulfovibrio magneticus

31% id,
88% cov

METXA_TRIV2 / Q3M5Q6: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Trichormus variabilis

29% id,
90% cov

More...

Psest_0279: methionine biosynthesis protein MetW
is similar to:
PaperBLAST

MTXAW_RHOBA / Q7UG04: Bifunctional methionine biosynthesis protein MetXA/MetW; EC 2.3.1.31 from Rhodopirellula baltica

38% id,
32% cov

Psest_0801: CBS-domain-containing membrane protein
is similar to:
PaperBLAST

METXA_METEZ / D7E9E0: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanohalobium evestigatum

26% id,
45% cov

Psest_1349: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
is similar to:
PaperBLAST

METXA_THET2 / Q9RA51: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Thermus thermophilus

27% id,
30% cov

Psest_3308: KpsF/GutQ family protein
is similar to:
PaperBLAST

METXA_METMS / D5E9R7: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanohalophilus mahii

32% id,
24% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3173894-3175375 (frame -3) on Psest_Contig47.1
is similar to:
PaperBLAST

METXA_METFP / K2QXP6: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanobacterium formicicum
Also see hits to annotated proteins above

25% id,
39% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory