Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 38 curated entries in PaperBLAST's database that match '2.3.3.13' as complete word(s).

These curated entries have 31 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_1056: 2-isopropylmalate synthase, bacterial type is similar to:	PaperBLAST
LEU1_NEIMB / Q9JZG1: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Neisseria meningitidis Q9JZG1: 2-isopropylmalate synthase (EC 2.3.3.13) from Neisseria meningitidis	66% id, 99% cov
LEU11_LEPIN / Q8F445: 2-isopropylmalate synthase 1; Alpha-IPM synthase 1; Alpha-isopropylmalate synthase 1; EC 2.3.3.13 from Leptospira interrogans	54% id, 100% cov
LEU1_SALTY / P15875: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Salmonella typhimurium	52% id, 97% cov
LeuA / b0074: 2-isopropylmalate synthase (EC 2.3.3.13) from Escherichia coli leuA / P09151: 2-isopropylmalate synthase (EC 2.3.3.13) from Escherichia coli	51% id, 97% cov
Echvi_3833: 2-isopropylmalate synthase (EC 2.3.3.13) from Echinicola vietnamensis	52% id, 96% cov
CA265_RS15855: 2-isopropylmalate synthase (EC 2.3.3.13) from Pedobacter sp.	50% id, 99% cov
Q72JC9: 2-isopropylmalate synthase (EC 2.3.3.13) from Thermus thermophilus	48% id, 99% cov
BT1861: 2-isopropylmalate synthase (EC 2.3.3.13) from Bacteroides thetaiotaomicron	48% id, 99% cov
K4CJ56: 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum lycopersicum	51% id, 89% cov
A0A0G2T6D7: 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum pennellii	53% id, 85% cov
LEU1_METJA / Q58595: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Methanocaldococcus jannaschii Q58595: 2-isopropylmalate synthase (EC 2.3.3.13) from Methanocaldococcus jannaschii	47% id, 94% cov
LEU1_SULAC / Q4JA78: 2-isopropylmalate synthase; IPMS; Alpha-isopropylmalate synthase; Alpha-IPM synthase; EC 2.3.3.13 from Sulfolobus acidocaldarius	46% id, 96% cov
K4C627: 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum lycopersicum	50% id, 86% cov
Q2QXY9: 2-isopropylmalate synthase (EC 2.3.3.13) from Oryza sativa	49% id, 84% cov
Q2RAP8: 2-isopropylmalate synthase (EC 2.3.3.13) from Oryza sativa	49% id, 84% cov
LEU1_SOYBN / Q39891: Probable 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; Late nodulin-56; N-56; EC 2.3.3.13 from Glycine max	45% id, 93% cov
LEU12_ARATH / Q9C550: 2-isopropylmalate synthase 2, chloroplastic; 2-isopropylmalate synthase 1; Methylthioalkylmalate synthase-like 3; EC 2.3.3.13 from Arabidopsis thaliana Q9C550: 2-isopropylmalate synthase (EC 2.3.3.13) from Arabidopsis thaliana	49% id, 85% cov
Q30DX9: 2-isopropylmalate synthase (EC 2.3.3.13) from Brassica insularis	48% id, 85% cov
LEU11_ARATH / Q9LPR4: 2-isopropylmalate synthase 1, chloroplastic; Methylthioalkylmalate synthase-like 4; EC 2.3.3.13 from Arabidopsis thaliana Q9LPR4: 2-isopropylmalate synthase (EC 2.3.3.13) from Arabidopsis thaliana	48% id, 84% cov
Q9FG67: 2-isopropylmalate synthase (EC 2.3.3.13); methylthioalkylmalate synthase (EC 2.3.3.17) from Arabidopsis thaliana	46% id, 85% cov
Q9FN52: 2-isopropylmalate synthase (EC 2.3.3.13); methylthioalkylmalate synthase (EC 2.3.3.17) from Arabidopsis thaliana	48% id, 78% cov
B0SN40: 2-isopropylmalate synthase (EC 2.3.3.13) from Leptospira biflexa	31% id, 98% cov
LEU12_LEPIN / Q8F8T4: 2-isopropylmalate synthase 2; Alpha-IPM synthase 2; Alpha-isopropylmalate synthase 2; EC 2.3.3.13 from Leptospira interrogans	33% id, 82% cov
LEU9_YEAST / Q12166: 2-isopropylmalate synthase 2, mitochondrial; Alpha-IPM synthase 2; Alpha-isopropylmalate synthase 2; Alpha-isopropylmalate synthase II; EC 2.3.3.13 from Saccharomyces cerevisiae	26% id, 88% cov
LEU1_YEAST / P06208: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Saccharomyces cerevisiae	25% id, 88% cov
AMT7_ALTAL / C9K7B8: Isopropyl malate synthase AMT7; AM-toxin biosynthesis protein 7; EC 2.3.3.13 from Alternaria alternata	28% id, 55% cov
HTYA_ASPRU / K0E4E5: Isopropyl malate synthase htyA; L-homotyrosine biosynthetic cluster protein A; EC 2.3.3.13 from Aspergillus rugulosus	25% id, 56% cov
LEU1_CORGL / P42455: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Corynebacterium glutamicum	28% id, 50% cov
GLOH_GLAL2 / S3D9F8: Isopropyl malate synthase gloH; L-homotyrosine biosynthesis sub-cluster protein gloH; Pneumocandin biosynthesis cluster protein H; EC 2.3.3.13 from Glarea lozoyensis	27% id, 51% cov
LEU1_MYCTO / P9WQB2: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Mycobacterium tuberculosis LEU1_MYCTU / P9WQB3: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Mycobacterium tuberculosis P9WQB3: 2-isopropylmalate synthase (EC 2.3.3.13) from Mycobacterium tuberculosis	28% id, 49% cov
More...

Psest_1277: 2-isopropylmalate synthase, yeast type is similar to:	PaperBLAST
LEU1_CORGL / P42455: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Corynebacterium glutamicum	56% id, 92% cov
LEU9_YEAST / Q12166: 2-isopropylmalate synthase 2, mitochondrial; Alpha-IPM synthase 2; Alpha-isopropylmalate synthase 2; Alpha-isopropylmalate synthase II; EC 2.3.3.13 from Saccharomyces cerevisiae	50% id, 95% cov
LEU1_YEAST / P06208: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Saccharomyces cerevisiae	51% id, 92% cov
LEU1_MYCTO / P9WQB2: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Mycobacterium tuberculosis LEU1_MYCTU / P9WQB3: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Mycobacterium tuberculosis P9WQB3: 2-isopropylmalate synthase (EC 2.3.3.13) from Mycobacterium tuberculosis	54% id, 86% cov
HTYA_ASPRU / K0E4E5: Isopropyl malate synthase htyA; L-homotyrosine biosynthetic cluster protein A; EC 2.3.3.13 from Aspergillus rugulosus	41% id, 93% cov
AMT7_ALTAL / C9K7B8: Isopropyl malate synthase AMT7; AM-toxin biosynthesis protein 7; EC 2.3.3.13 from Alternaria alternata	40% id, 92% cov
GLOH_GLAL2 / S3D9F8: Isopropyl malate synthase gloH; L-homotyrosine biosynthesis sub-cluster protein gloH; Pneumocandin biosynthesis cluster protein H; EC 2.3.3.13 from Glarea lozoyensis	49% id, 56% cov
B0SN40: 2-isopropylmalate synthase (EC 2.3.3.13) from Leptospira biflexa	28% id, 96% cov
CA265_RS15855: 2-isopropylmalate synthase (EC 2.3.3.13) from Pedobacter sp.	27% id, 97% cov
LEU1_NEIMB / Q9JZG1: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Neisseria meningitidis Q9JZG1: 2-isopropylmalate synthase (EC 2.3.3.13) from Neisseria meningitidis	26% id, 99% cov
LEU11_LEPIN / Q8F445: 2-isopropylmalate synthase 1; Alpha-IPM synthase 1; Alpha-isopropylmalate synthase 1; EC 2.3.3.13 from Leptospira interrogans	26% id, 98% cov
BT1861: 2-isopropylmalate synthase (EC 2.3.3.13) from Bacteroides thetaiotaomicron	26% id, 98% cov
LEU12_LEPIN / Q8F8T4: 2-isopropylmalate synthase 2; Alpha-IPM synthase 2; Alpha-isopropylmalate synthase 2; EC 2.3.3.13 from Leptospira interrogans	28% id, 88% cov
LEU1_SOYBN / Q39891: Probable 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; Late nodulin-56; N-56; EC 2.3.3.13 from Glycine max	26% id, 92% cov
Echvi_3833: 2-isopropylmalate synthase (EC 2.3.3.13) from Echinicola vietnamensis	25% id, 96% cov
LEU1_SULAC / Q4JA78: 2-isopropylmalate synthase; IPMS; Alpha-isopropylmalate synthase; Alpha-IPM synthase; EC 2.3.3.13 from Sulfolobus acidocaldarius	27% id, 86% cov
Q72JC9: 2-isopropylmalate synthase (EC 2.3.3.13) from Thermus thermophilus	24% id, 94% cov
LEU1_METJA / Q58595: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Methanocaldococcus jannaschii Q58595: 2-isopropylmalate synthase (EC 2.3.3.13) from Methanocaldococcus jannaschii	24% id, 97% cov
K4C627: 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum lycopersicum	27% id, 85% cov
LeuA / b0074: 2-isopropylmalate synthase (EC 2.3.3.13) from Escherichia coli leuA / P09151: 2-isopropylmalate synthase (EC 2.3.3.13) from Escherichia coli	24% id, 96% cov
LEU1_SALTY / P15875: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Salmonella typhimurium	23% id, 96% cov
Q2RAP8: 2-isopropylmalate synthase (EC 2.3.3.13) from Oryza sativa	27% id, 82% cov
Q2QXY9: 2-isopropylmalate synthase (EC 2.3.3.13) from Oryza sativa	27% id, 82% cov
LEU11_ARATH / Q9LPR4: 2-isopropylmalate synthase 1, chloroplastic; Methylthioalkylmalate synthase-like 4; EC 2.3.3.13 from Arabidopsis thaliana Q9LPR4: 2-isopropylmalate synthase (EC 2.3.3.13) from Arabidopsis thaliana	26% id, 84% cov
Q30DX9: 2-isopropylmalate synthase (EC 2.3.3.13) from Brassica insularis	26% id, 84% cov
LEU12_ARATH / Q9C550: 2-isopropylmalate synthase 2, chloroplastic; 2-isopropylmalate synthase 1; Methylthioalkylmalate synthase-like 3; EC 2.3.3.13 from Arabidopsis thaliana Q9C550: 2-isopropylmalate synthase (EC 2.3.3.13) from Arabidopsis thaliana	26% id, 83% cov
A0A0G2T6D7: 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum pennellii	27% id, 79% cov
K4CJ56: 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum lycopersicum	26% id, 80% cov
Q9FN52: 2-isopropylmalate synthase (EC 2.3.3.13); methylthioalkylmalate synthase (EC 2.3.3.17) from Arabidopsis thaliana	27% id, 74% cov
Q9FG67: 2-isopropylmalate synthase (EC 2.3.3.13); methylthioalkylmalate synthase (EC 2.3.3.17) from Arabidopsis thaliana	24% id, 76% cov
More...

Psest_2661: Isopropylmalate/homocitrate/citramalate synthases is similar to:	PaperBLAST
LEU1_NEIMB / Q9JZG1: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Neisseria meningitidis Q9JZG1: 2-isopropylmalate synthase (EC 2.3.3.13) from Neisseria meningitidis	23% id, 56% cov
LEU11_LEPIN / Q8F445: 2-isopropylmalate synthase 1; Alpha-IPM synthase 1; Alpha-isopropylmalate synthase 1; EC 2.3.3.13 from Leptospira interrogans	22% id, 56% cov
LEU1_METJA / Q58595: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Methanocaldococcus jannaschii Q58595: 2-isopropylmalate synthase (EC 2.3.3.13) from Methanocaldococcus jannaschii	24% id, 50% cov

Psest_4084: oxaloacetate decarboxylase alpha subunit is similar to:	PaperBLAST
LEU1_METJA / Q58595: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Methanocaldococcus jannaschii Q58595: 2-isopropylmalate synthase (EC 2.3.3.13) from Methanocaldococcus jannaschii	23% id, 57% cov

Psest_2980: oxaloacetate decarboxylase alpha subunit is similar to:	PaperBLAST
LEU1_METJA / Q58595: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Methanocaldococcus jannaschii Q58595: 2-isopropylmalate synthase (EC 2.3.3.13) from Methanocaldococcus jannaschii	27% id, 29% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory