Searching in Pseudomonas stutzeri RCH2 (psRCH2)
Found 22 curated entries in PaperBLAST's database that match '2.3.3.14' as complete word(s).
These curated entries have 14 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Pseudomonas stutzeri RCH2, or try another query
| Psest_1056: 2-isopropylmalate synthase, bacterial type is similar to: | PaperBLAST |
D0VY45: homocitrate synthase (EC 2.3.3.14) from Lotus japonicus | 48% id, 95% cov |
P58637: homocitrate synthase (EC 2.3.3.14) from Nostoc sp. | 38% id, 99% cov |
AKSA_METJA / Q57926: Homocitrate synthase AksA; (R)-homo(2)citrate synthase; (R)-homo(3)citrate synthase; EC 2.3.3.14; EC 2.3.3.- from Methanocaldococcus jannaschii | 41% id, 91% cov |
| Psest_1277: 2-isopropylmalate synthase, yeast type is similar to: | PaperBLAST |
D0VY45: homocitrate synthase (EC 2.3.3.14) from Lotus japonicus | 27% id, 97% cov |
AKSA_METJA / Q57926: Homocitrate synthase AksA; (R)-homo(2)citrate synthase; (R)-homo(3)citrate synthase; EC 2.3.3.14; EC 2.3.3.- from Methanocaldococcus jannaschii | 26% id, 85% cov |
HOSA_SULAC / Q4J989: Homocitrate synthase; HCS; EC 2.3.3.14 from Sulfolobus acidocaldarius | 22% id, 76% cov |
| Psest_2980: oxaloacetate decarboxylase alpha subunit is similar to: | PaperBLAST |
A0A0S6UXF5: homocitrate synthase (EC 2.3.3.14) from Bradyrhizobium sp. | 24% id, 65% cov |
P58637: homocitrate synthase (EC 2.3.3.14) from Nostoc sp. | 32% id, 31% cov |
| Psest_1079: Isopropylmalate/homocitrate/citramalate synthases is similar to: | PaperBLAST |
HOSA_SULTO / Q971S5: Homocitrate synthase; HCS; EC 2.3.3.14 from Sulfurisphaera tokodaii | 26% id, 49% cov |
HOSA_SULAC / Q4J989: Homocitrate synthase; HCS; EC 2.3.3.14 from Sulfolobus acidocaldarius | 24% id, 50% cov |
| Psest_4084: oxaloacetate decarboxylase alpha subunit is similar to: | PaperBLAST |
P58637: homocitrate synthase (EC 2.3.3.14) from Nostoc sp. | 29% id, 28% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3171710-3173599 (frame -3) on Psest_Contig47.1 is similar to: | PaperBLAST |
A0A0S6UXF5: homocitrate synthase (EC 2.3.3.14) from Bradyrhizobium sp. | 24% id, 67% cov |
Lawrence Berkeley National Laboratory