Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 107 curated entries in PaperBLAST's database that match '2.4.1.13' as complete word(s).

These curated entries have 69 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_0460: Glycosyltransferase is similar to:	PaperBLAST
SUS_NITEU / Q820M5: Sucrose synthase; SuSyNe; EC 2.4.1.13 from Nitrosomonas europaea CAD85125.1: sucrose synthase (Ss2;SuSyNe;NE1214) (EC 2.4.1.13) Q820M5: sucrose synthase (EC 2.4.1.13) from Nitrosomonas europaea	25% id, 29% cov
SUS_DENA2 / D4H6M0: Sucrose synthase; SuSyDa; EC 2.4.1.13 from Denitrovibrio acetiphilus ADD69694.1: sucrose synthase (SuSyDa;Dacet_2944) (EC 2.4.1.13) D4H6M0: sucrose synthase (EC 2.4.1.13) from Denitrovibrio acetiphilus	25% id, 28% cov
P49037: sucrose synthase (EC 2.4.1.13) from Solanum lycopersicum	23% id, 28% cov
CAD61188.1: sucrose synthase 4 (Sus4) (EC 2.4.1.13) Q7Y078: sucrose synthase (EC 2.4.1.13) from Solanum tuberosum	23% id, 28% cov
E0Z1D0: sucrose synthase (EC 2.4.1.13) from Solanum lycopersicum	21% id, 28% cov
BAC91548.1: sucrose synthase (SusA;SpsA;Gv-SuS;gvip490;gll3607) (EC 2.4.1.13)	23% id, 23% cov
SUS_ACICK / A0A059ZV61: Sucrose synthase; SuSyAc; EC 2.4.1.13 from Acidithiobacillus caldus AIA55343.1: sucrose synthase (SuSyAc;Acaty_c1477) (EC 2.4.1.13) A0A059ZV61: sucrose synthase (EC 2.4.1.13) from Acidithiobacillus caldus	32% id, 16% cov
AAA33841.1: sucrose synthase (Sus1;SuSy;SS16) (EC 2.4.1.13)	24% id, 20% cov
CAB40794.1: sucrose synthase S1 (MtSucS1;SucS1) (EC 2.4.1.13)	24% id, 20% cov
AAC17867.1: sucrose synthase (MsSUS1) (EC 2.4.1.13)	24% id, 20% cov
P31926: sucrose synthase (EC 2.4.1.13) from Vicia faba	23% id, 20% cov
Q9T0M9: sucrose synthase (EC 2.4.1.13) from Pisum sativum	23% id, 20% cov
Q0E7D4: sucrose synthase (EC 2.4.1.13) from Coffea arabica	24% id, 19% cov
Q84T18: sucrose synthase (EC 2.4.1.13) from Solanum tuberosum	26% id, 17% cov
E0Z1D1: sucrose synthase (EC 2.4.1.13) from Solanum lycopersicum	26% id, 17% cov
AAC28107.1: nodule-enhanced sucrose synthase (Ness) (EC 2.4.1.13) O81610: sucrose synthase (EC 2.4.1.13) from Pisum sativum	24% id, 18% cov
SUS_MELRP / I7A3T6: Sucrose synthase; SuSyMr; EC 2.4.1.13 from Melioribacter roseus AFN74551.1: sucrose synthase (SuSyMr;MROS_1314) (EC 2.4.1.13) I7A3T6: sucrose synthase (EC 2.4.1.13) from Melioribacter roseus	22% id, 17% cov
BAA08304.1: sucrose-phosphate synthase (Sps1) (EC 2.4.1.13)	27% id, 14% cov
SUS_THEVB / Q8DK23: Sucrose synthase; SuSyTe; EC 2.4.1.13 from Thermosynechococcus vestitus BAC08600.1: ADP-Glc: sucrose synthase (SusA;Te-SuS;Tlr1047) (EC 2.4.1.13)	32% id, 10% cov
CAA09297.1: sucrose synthase II (SS-II;SusA) (EC 2.4.1.13)	30% id, 10% cov
SUS1_HORVU / P31922: Sucrose synthase 1; Sucrose-UDP glucosyltransferase 1; EC 2.4.1.13 from Hordeum vulgare CAA46701.1: sucrose synthase 1 (Ss1) (EC 2.4.1.13) P31922: sucrose synthase (EC 2.4.1.13) from Hordeum vulgare	24% id, 12% cov
CAB38022.1: sucrose synthase (Ss2) (EC 2.4.1.13)	34% id, 8% cov
SUS2_ORYSJ / P30298: Sucrose synthase 2; OsSUS2; Sucrose synthase 1; RSs1; Sucrose-UDP glucosyltransferase 2; EC 2.4.1.13 from Oryza sativa AAL31375.1: sucrose synthase 1 (Os06g0194900) (EC 2.4.1.13)	24% id, 12% cov
CAA03935.1: Sucrose synthase type 2 (EC 2.4.1.13)	24% id, 12% cov
SUS2_HORVU / P31923: Sucrose synthase 2; Sucrose-UDP glucosyltransferase 2; EC 2.4.1.13 from Hordeum vulgare CAA49551.1: Sucrose synthase 2 (EC 2.4.1.13)	24% id, 12% cov
CAA04512.1: sucrose synthase 2 (Sus2) (EC 2.4.1.13) O24301: sucrose synthase (EC 2.4.1.13) from Pisum sativum	31% id, 9% cov
AAL50571.1: sucrose synthase (Sus2;BoSuS2) (EC 2.4.1.13)	23% id, 12% cov
SUS6_ARATH / Q9FX32: Sucrose synthase 6; AtSUS6; Sucrose-UDP glucosyltransferase 6; EC 2.4.1.13 from Arabidopsis thaliana SUS6 / Q9FX32: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana Q9FX32: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana	33% id, 7% cov
More...

Psest_2609: Glycosyltransferase is similar to:	PaperBLAST
SUS_ACICK / A0A059ZV61: Sucrose synthase; SuSyAc; EC 2.4.1.13 from Acidithiobacillus caldus AIA55343.1: sucrose synthase (SuSyAc;Acaty_c1477) (EC 2.4.1.13) A0A059ZV61: sucrose synthase (EC 2.4.1.13) from Acidithiobacillus caldus	26% id, 27% cov
C6H0M2: sucrose synthase (EC 2.4.1.13) from Hordeum vulgare	25% id, 25% cov
BAA89049.1: sucrose synthase (CitSUS1-2) (EC 2.4.1.13)	25% id, 25% cov
F8SM21: sucrose synthase (EC 2.4.1.13) from Hordeum vulgare	25% id, 23% cov
AAD28641.1: sucrose synthase (EC 2.4.1.13) Q9XGB7: sucrose synthase (EC 2.4.1.13) from Gossypium hirsutum	25% id, 23% cov
G1FNX7: sucrose synthase (EC 2.4.1.13) from Gossypium hirsutum	24% id, 24% cov
K9K7W3: sucrose synthase (EC 2.4.1.13) from Cucumis sativus	24% id, 23% cov
SUS5_ORYSJ / H6TFZ4: Sucrose synthase 5; OsSUS5; Sucrose-UDP glucosyltransferase 5; EC 2.4.1.13 from Oryza sativa	27% id, 19% cov
SUS7_ORYSJ / Q7XNX6: Sucrose synthase 7; OsSUS7; Sucrose-UDP glucosyltransferase 7; EC 2.4.1.13 from Oryza sativa	27% id, 19% cov
SUS6_ARATH / Q9FX32: Sucrose synthase 6; AtSUS6; Sucrose-UDP glucosyltransferase 6; EC 2.4.1.13 from Arabidopsis thaliana SUS6 / Q9FX32: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana Q9FX32: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana	23% id, 21% cov
SUS_MELRP / I7A3T6: Sucrose synthase; SuSyMr; EC 2.4.1.13 from Melioribacter roseus AFN74551.1: sucrose synthase (SuSyMr;MROS_1314) (EC 2.4.1.13) I7A3T6: sucrose synthase (EC 2.4.1.13) from Melioribacter roseus	29% id, 17% cov
SUS4_ARATH / Q9LXL5: Sucrose synthase 4; AtSUS4; Sucrose-UDP glucosyltransferase 4; EC 2.4.1.13 from Arabidopsis thaliana SUS4 / Q9LXL5: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana Q9LXL5: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana	28% id, 16% cov
BAA01108.1: sucrose synthase (Ss1) (EC 2.4.1.13)	27% id, 16% cov
SUS1_ARATH / P49040: Sucrose synthase 1; AtSUS1; Sucrose-UDP glucosyltransferase 1; EC 2.4.1.13 from Arabidopsis thaliana NP_197583.1: sucrose synthase 1 (Sus1;AtSus1;At5g20830) (EC 2.4.1.13) SUS1 / P49040: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana P49040: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana	27% id, 16% cov
AAC41682.1: sucrose synthase 3 (SS3;Os07g0616800) (EC 2.4.1.13)	26% id, 16% cov
SUS3_ORYSJ / Q43009: Sucrose synthase 3; OsSUS3; RSs3; Sucrose-UDP glucosyltransferase 3; EC 2.4.1.13 from Oryza sativa Q43009: sucrose synthase (EC 2.4.1.13) from Oryza sativa	26% id, 16% cov
BAA88905.1: sucrose synthase (CitSUS1) (EC 2.4.1.13)	29% id, 15% cov
AAN76498.1: sucrose synthase (EC 2.4.1.13)	25% id, 16% cov
Q00P15: sucrose synthase (EC 2.4.1.13) from Eucalyptus grandis	24% id, 16% cov
SUS_SOYBN / P13708: Sucrose synthase; Nodulin-100; N-100; Sucrose-UDP glucosyltransferase; EC 2.4.1.13 from Glycine max AAC39323.1: sucrose synthase (SS;GmSS;SUSY;GmSuSy;GmSUS;Nodulin-100) (EC 2.4.1.13) SS / P13708: sucrose synthase (EC 2.4.1.13) from Glycine max P13708: sucrose synthase (EC 2.4.1.13) from Glycine max	28% id, 12% cov
CAC32462.1: sucrose synthase 3 (Sus3) (EC 2.4.1.13) Q9AVR8: sucrose synthase (EC 2.4.1.13) from Pisum sativum	29% id, 11% cov
Q00P16: sucrose synthase (EC 2.4.1.13) from Eucalyptus grandis	25% id, 12% cov
More...

Psest_3825: Beta-propeller domains of methanol dehydrogenase type is similar to:	PaperBLAST
BAA08304.1: sucrose-phosphate synthase (Sps1) (EC 2.4.1.13)	49% id, 3% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory