Curated BLAST
Searching in Pseudomonas stutzeri RCH2 (psRCH2)
Found 120 curated entries in PaperBLAST's database that match '2.4.2.2'.
These curated entries have 82 distinct sequences.
Running ublast with E ≤ 0.01
Found 9 relevant proteins in Pseudomonas stutzeri RCH2, or try another query
Psest_1242: tRNA-guanine transglycosylase, queuosine-34-forming
is similar to: | PaperBLAST |
TGT_ECOLI / P0A847: Queuine tRNA-ribosyltransferase; Guanine insertion enzyme; tRNA-guanine transglycosylase; EC 2.4.2.29 from Escherichia coli
Tgt: tRNA-guanine transglycosylase (EC 2.4.2.29) from Escherichia coli
tgt / P0A847: tRNA-guanine transglycosylase (EC 2.4.2.29) from Escherichia coli
P0A847: tRNA-guanosine34 preQ1 transglycosylase (EC 2.4.2.29) from Escherichia coli | 70% id,
99% cov |
Q54177: tRNA-guanosine34 preQ1 transglycosylase (EC 2.4.2.29) from Shigella flexneri | 70% id,
99% cov |
tgt / Q183P1: preQ1 tRNA-ribosyltransferase (EC 2.4.2.29) from Clostridioides difficile | 56% id,
98% cov |
TGT_ZYMMO / P28720: Queuine tRNA-ribosyltransferase; Guanine insertion enzyme; tRNA-guanine transglycosylase; EC 2.4.2.29 from Zymomonas mobilis
P28720: tRNA-guanosine34 preQ1 transglycosylase (EC 2.4.2.29); tRNA-guanosine34 queuine transglycosylase (EC 2.4.2.64) from Zymomonas mobilis | 55% id,
95% cov |
2ashA / Q9X1P7: Crystal structure of queuine tRNA-ribosyltransferase (ec 2.4.2.29) (tRNA-guanine (tm1561) from thermotoga maritima at 1.90 a resolution | 52% id,
97% cov |
Q9BXR0: tRNA-guanosine34 preQ1 transglycosylase (EC 2.4.2.29); tRNA-guanosine34 queuine transglycosylase (subunit 2/2) (EC 2.4.2.64) from Homo sapiens | 43% id,
89% cov |
Q8THU2: tRNA-guanosine34 preQ1 transglycosylase (subunit 2/2) (EC 2.4.2.29); tRNA-guanine15 transglycosylase (EC 2.4.2.48) from Methanosarcina acetivorans | 26% id,
66% cov |
More... |
Psest_2502: Uncharacterized protein conserved in bacteria
is similar to: | PaperBLAST |
A0A080UUN2: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Serratia marcescens | 55% id,
97% cov |
PPNP_ECOLI / P0C037: Pyrimidine/purine nucleoside phosphorylase; Adenosine phosphorylase; Cytidine phosphorylase; Guanosine phosphorylase; Inosine phosphorylase; Thymidine phosphorylase; Uridine phosphorylase; Xanthosine phosphorylase; EC 2.4.2.1; EC 2.4.2.2 from Escherichia coli
PpnP / b0391: nucleoside phosphorylase PpnP (EC 2.4.2.15; EC 2.4.2.1; EC 2.4.2.2; EC 2.4.2.4; EC 2.4.2.3) from Escherichia coli
ppnP / P0C037: nucleoside phosphorylase PpnP (EC 2.4.2.15; EC 2.4.2.2; EC 2.4.2.1) from Escherichia coli
P0C037: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2); thymidine phosphorylase (EC 2.4.2.4) from Escherichia coli | 50% id,
99% cov |
Psest_0710: uncharacterized protein, YfiH family
is similar to: | PaperBLAST |
PURNU_ECOLI / P33644: Purine nucleoside phosphorylase YfiH; Adenosine deaminase YfiH; Polyphenol oxidase YfiH; S-methyl-5'-thioadenosine phosphorylase YfiH; EC 2.4.2.1; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.28 from Escherichia coli
yfiH / P33644: purine nucleoside phosphorylase YfiH (EC 2.4.2.1; EC 2.4.2.28; EC 3.5.4.4; EC 1.10.3.2) from Escherichia coli | 54% id,
98% cov |
PURNU_GEOS3 / P84138: Purine nucleoside phosphorylase YlmD; Adenosine deaminase YlmD; S-methyl-5'-thioadenosine phosphorylase YlmD; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Geobacillus stearothermophilus | 34% id,
93% cov |
PURNU_UNKP / Q1EIR0: Adenosine deaminase RL5; Laccase RL5; Multicopper oxidase RL5; Polyphenol oxidase; Purine nucleoside phosphorylase RL5; S-methyl-5'-thioadenosine phosphorylase RL5; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.1; EC 2.4.2.28 from Unknown prokaryotic | 30% id,
92% cov |
PURNU_BACTN / Q89ZI8: Purine nucleoside phosphorylase BT_4389; Adenosine deaminase BT_4389; S-methyl-5'-thioadenosine phosphorylase BT_4389; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Bacteroides thetaiotaomicron | 33% id,
61% cov |
LACC1_HUMAN / Q8IV20: Purine nucleoside phosphorylase LACC1; Adenosine deaminase LACC1; Fatty acid metabolism-immunity nexus; Guanosine phosphorylase LACC1; Laccase domain-containing protein 1; S-methyl-5'-thioadenosine phosphorylase LACC1; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Homo sapiens | 31% id,
45% cov |
LACC1_MOUSE / Q8BZT9: Purine nucleoside phosphorylase LACC1; Adenosine deaminase LACC1; Fatty acid metabolism-immunity nexus; Guanosine phosphorylase LACC1; Laccase domain-containing protein 1; S-methyl-5'-thioadenosine phosphorylase LACC1; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Mus musculus | 27% id,
47% cov |
More... |
Psest_3006: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
is similar to: | PaperBLAST |
cobT / P29935: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase subunit (EC 2.4.2.21) from Sinorhizobium sp.
P29935: nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Pseudomonas denitrificans | 44% id,
94% cov |
cobT / A0A0K1TPX5: nicotinate-nucleotide--5-methoxybenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Moorella thermoacetica | 42% id,
94% cov |
cobT / A0A1D9FP51: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Clostridium formicaceticum | 39% id,
96% cov |
COBT_SALTY / Q05603: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; NN:DBI PRT; N(1)-alpha-phosphoribosyltransferase; EC 2.4.2.21 from Salmonella typhimurium
cobT / Q05603: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase subunit (EC 2.4.2.21) from Salmonella typhimurium
Q05603: nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Salmonella enterica | 38% id,
97% cov |
CobT / b1991: nicotinate-nucleotide—dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Escherichia coli | 38% id,
93% cov |
arsB / F6MZ56: nicotinate D-ribonucleotide:phenol phospho-D-ribosyltransferase β subunit (EC 2.4.2.21; EC 2.4.2.55) from Sporomusa ovata
F6MZ56: nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (subunit 1/2) (EC 2.4.2.21) from Sporomusa ovata | 34% id,
93% cov |
cobT / D1BPH1: nicotinate-nucleotide--methylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Veillonella parvula | 31% id,
99% cov |
arsA / F6MZ55: nicotinate D-ribonucleotide:phenol phospho-D-ribosyltransferase α subunit (EC 2.4.2.21; EC 2.4.2.55) from Sporomusa ovata
F6MZ55: nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (subunit 2/2) (EC 2.4.2.21) from Sporomusa ovata | 33% id,
95% cov |
D7GJ95: aerobic 5,6-dimethylbenzimidazole synthase (EC 1.13.11.79); nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Propionibacterium freudenreichii | 33% id,
51% cov |
More... |
Psest_2642: 5'-deoxy-5'-methylthioadenosine phosphorylase
is similar to: | PaperBLAST |
MTAP_MYCS2 / A0QR54: S-methyl-5'-thioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase; MTA phosphorylase; MTAP; EC 2.4.2.28 from Mycolicibacterium smegmatis | 41% id,
85% cov |
MTAP_PYRFU / Q8U4Q8: S-methyl-5'-thioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase; MTA phosphorylase; MTAP; PfMTAP; EC 2.4.2.28 from Pyrococcus furiosus
Q8U4Q8: S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28) from Pyrococcus furiosus | 37% id,
93% cov |
MTAP_SACS2 / Q97W94: S-methyl-5'-thioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase; MTA phosphorylase; MTAP; MTAPII; EC 2.4.2.28 from Saccharolobus solfataricus
Q97W94: purine-nucleoside phosphorylase (EC 2.4.2.1); S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28) from Saccharolobus solfataricus | 37% id,
89% cov |
MTAP_MYCTU / O06401: S-methyl-5'-thioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase; MTA phosphorylase; MTAP; EC 2.4.2.28 from Mycobacterium tuberculosis
O06401: S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28) from Mycobacterium tuberculosis | 37% id,
88% cov |
MTAP_THEKO / Q5JEQ6: S-methyl-5'-thioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase; MTA phosphorylase; MTAP; Nucleoside phosphorylase; EC 2.4.2.28 from Thermococcus kodakarensis | 38% id,
79% cov |
C6KFA4: S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28) from uncultured bacterium | 42% id,
69% cov |
I0B503: S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28) from Schistosoma mansoni | 37% id,
75% cov |
MTAP_RHORT / Q2RXH9: S-methyl-5'-thioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase; MTA phosphorylase; MTAP; EC 2.4.2.28 from Rhodospirillum rubrum | 38% id,
70% cov |
MTAP_BOVIN / Q3MHF7: S-methyl-5'-thioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase; MTA phosphorylase; MTAP; MTAPase; EC 2.4.2.28 from Bos taurus | 30% id,
87% cov |
Q9CQ65: S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28) from Mus musculus | 30% id,
87% cov |
MTAP_HUMAN / Q13126: S-methyl-5'-thioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase; MTA phosphorylase; MTAP; MTAPase; EC 2.4.2.28 from Homo sapiens
MTAP / Q13126: S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28) from Homo sapiens
Q13126: S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28) from Homo sapiens | 30% id,
87% cov |
MTAP_DROME / Q9V813: S-methyl-5'-thioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase; MTA phosphorylase; MTAP; MTAPase; EC 2.4.2.28 from Drosophila melanogaster | 29% id,
85% cov |
MTAP_SCHPO / Q09816: S-methyl-5'-thioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase; MTA phosphorylase; MTAP; MTAPase; EC 2.4.2.28 from Schizosaccharomyces pombe | 34% id,
70% cov |
MTAP_YEAST / Q07938: S-methyl-5'-thioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase; MTA phosphorylase; MTAP; MTAPase; Multicopy enhancer of UAS2; EC 2.4.2.28 from Saccharomyces cerevisiae | 35% id,
40% cov |
More... |
Psest_3523: putative thymidine phosphorylase
is similar to: | PaperBLAST |
Q5SHF9: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Thermus thermophilus | 31% id,
91% cov |
Q72HS4: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Thermus thermophilus | 31% id,
91% cov |
TYMP / P19971: thymidine phosphorylase monomer (EC 2.4.2.3; EC 2.4.2.2) from Homo sapiens | 29% id,
95% cov |
A0A178U4P5: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Parageobacillus thermoglucosidasius | 28% id,
92% cov |
A0A0E2M090: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Lacticaseibacillus paracasei | 28% id,
91% cov |
PDP_BACSU / P39142: Pyrimidine-nucleoside phosphorylase; PYNP; Py-NPase; EC 2.4.2.2 from Bacillus subtilis
pdp / GB|CAB15976.2: pyrimidine-nucleoside phosphorylase; EC 2.4.2.2 from Bacillus subtilis | 27% id,
92% cov |
A0A0D1XZI7: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Aneurinibacillus migulanus | 27% id,
91% cov |
PDP_GEOSE / P77836: Pyrimidine-nucleoside phosphorylase; PYNP; Py-NPase; EC 2.4.2.2 from Geobacillus stearothermophilus
pyn / GB|BAA13512.1: pyrimidine-nucleoside phosphorylase; EC 2.4.2.2 from Geobacillus stearothermophilus
pdp / P77836: pyrimidine-nucleoside phosphorylase monomer (EC 2.4.2.3; EC 2.4.2.2) from Geobacillus stearothermophilus
P77836: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Geobacillus stearothermophilus | 27% id,
92% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 8 reading frames. Except for 1 reading frames, these were redundant with annotated proteins.
These remaining reading frames may be pseudogenes, omissions in the genome annotation,
or N-terminal extensions of annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory