Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 32 curated entries in PaperBLAST's database that match '2.6.1.44' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_1004: Aspartate/tyrosine/aromatic aminotransferase
is similar to:
PaperBLAST

aspC / Q4FNY9: alanine—glyoxylate transaminase (EC 2.6.1.44) from Pelagibacter ubique

29% id,
96% cov

D2Z0I0: alanine-glyoxylate transaminase (EC 2.6.1.44) from Hydrogenobacter thermophilus

30% id,
95% cov

CRU31975 / Q42685: L-alanine aminotransferase monomer (EC 2.6.1.44; EC 2.6.1.2; EC 2.6.1.4) from Chlamydomonas reinhardtii

26% id,
71% cov

Psest_1772: Aspartate/tyrosine/aromatic aminotransferase
is similar to:
PaperBLAST

aspC / Q4FNY9: alanine—glyoxylate transaminase (EC 2.6.1.44) from Pelagibacter ubique

29% id,
95% cov

GGT1_ARATH / Q9LR30: Glutamate--glyoxylate aminotransferase 1; AtGGT2; Alanine aminotransferase GGT1; Alanine--glyoxylate aminotransferase GGT1; Alanine-2-oxoglutarate aminotransferase 1; EC 2.6.1.4; EC 2.6.1.2; EC 2.6.1.44; EC 2.6.1.- from Arabidopsis thaliana
AOAT1 / Q9LR30: alanine transaminase (EC 2.6.1.44; EC 2.6.1.2; EC 2.6.1.4) from Arabidopsis thaliana

26% id,
94% cov

GGT2_ARATH / Q9S7E9: Glutamate--glyoxylate aminotransferase 2; AtGGT2; Alanine aminotransferase GGT2; Alanine--glyoxylate aminotransferase GGT2; Alanine-2-oxoglutarate aminotransferase 2; EC 2.6.1.4; EC 2.6.1.2; EC 2.6.1.44; EC 2.6.1.- from Arabidopsis thaliana
AOAT2 / Q9S7E9: alanine transaminase (EC 2.6.1.44; EC 2.6.1.2; EC 2.6.1.4) from Arabidopsis thaliana

25% id,
95% cov

More...

Psest_3653: 4-aminobutyrate aminotransferase, prokaryotic type
is similar to:
PaperBLAST

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

33% id,
81% cov

AGT2_MOUSE / Q3UEG6: Alanine--glyoxylate aminotransferase 2, mitochondrial; AGT 2; (R)-3-amino-2-methylpropionate--pyruvate transaminase; Beta-ALAAT II; Beta-alanine-pyruvate aminotransferase; D-3-aminoisobutyrate-pyruvate aminotransferase; D-AIBAT; D-beta-aminoisobutyrate-pyruvate aminotransferase; EC 2.6.1.44; EC 2.6.1.40; EC 2.6.1.18 from Mus musculus
Q3UEG6: alanine-glyoxylate transaminase (EC 2.6.1.44) from Mus musculus

34% id,
79% cov

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

32% id,
80% cov

More...

Psest_1268: Aspartate/tyrosine/aromatic aminotransferase
is similar to:
PaperBLAST

aspC / Q4FNY9: alanine—glyoxylate transaminase (EC 2.6.1.44) from Pelagibacter ubique

26% id,
98% cov

D2Z0I0: alanine-glyoxylate transaminase (EC 2.6.1.44) from Hydrogenobacter thermophilus

24% id,
95% cov

Psest_2719: acetylornithine and succinylornithine aminotransferases/succinylornithine transaminase family
is similar to:
PaperBLAST

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

30% id,
83% cov

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

30% id,
83% cov

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana

31% id,
81% cov

More...

Psest_0306: adenosylmethionine-8-amino-7-oxononanoate transaminase
is similar to:
PaperBLAST

AGT2_MOUSE / Q3UEG6: Alanine--glyoxylate aminotransferase 2, mitochondrial; AGT 2; (R)-3-amino-2-methylpropionate--pyruvate transaminase; Beta-ALAAT II; Beta-alanine-pyruvate aminotransferase; D-3-aminoisobutyrate-pyruvate aminotransferase; D-AIBAT; D-beta-aminoisobutyrate-pyruvate aminotransferase; EC 2.6.1.44; EC 2.6.1.40; EC 2.6.1.18 from Mus musculus
Q3UEG6: alanine-glyoxylate transaminase (EC 2.6.1.44) from Mus musculus

30% id,
81% cov

AGT2_HUMAN / Q9BYV1: Alanine--glyoxylate aminotransferase 2, mitochondrial; AGT 2; (R)-3-amino-2-methylpropionate--pyruvate transaminase; Beta-ALAAT II; Beta-alanine-pyruvate aminotransferase; D-3-aminoisobutyrate-pyruvate aminotransferase; D-AIBAT; D-beta-aminoisobutyrate-pyruvate aminotransferase; EC 2.6.1.44; EC 2.6.1.40; EC 2.6.1.18 from Homo sapiens
AGXT2 / Q9BYV1: alanine--glyoxylate aminotransferase 2, mitochondrial (EC 2.6.1.44) from Homo sapiens
Q9BYV1: alanine-glyoxylate transaminase (EC 2.6.1.44) from Homo sapiens

29% id,
81% cov

Psest_4285: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
is similar to:
PaperBLAST

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

29% id,
81% cov

AGT2_RAT / Q64565: Alanine--glyoxylate aminotransferase 2, mitochondrial; AGT 2; (R)-3-amino-2-methylpropionate--pyruvate transaminase; Beta-ALAAT II; Beta-alanine-pyruvate aminotransferase; D-3-aminoisobutyrate-pyruvate aminotransferase; D-AIBAT; D-beta-aminoisobutyrate-pyruvate aminotransferase; EC 2.6.1.44; EC 2.6.1.40; EC 2.6.1.18 from Rattus norvegicus
Q64565: (R)-3-amino-2-methylpropionate-pyruvate transaminase (EC 2.6.1.40); alanine-glyoxylate transaminase (EC 2.6.1.44) from Rattus norvegicus

27% id,
86% cov

AGT2_MOUSE / Q3UEG6: Alanine--glyoxylate aminotransferase 2, mitochondrial; AGT 2; (R)-3-amino-2-methylpropionate--pyruvate transaminase; Beta-ALAAT II; Beta-alanine-pyruvate aminotransferase; D-3-aminoisobutyrate-pyruvate aminotransferase; D-AIBAT; D-beta-aminoisobutyrate-pyruvate aminotransferase; EC 2.6.1.44; EC 2.6.1.40; EC 2.6.1.18 from Mus musculus
Q3UEG6: alanine-glyoxylate transaminase (EC 2.6.1.44) from Mus musculus

27% id,
83% cov

More...

Psest_4306: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
is similar to:
PaperBLAST

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana

27% id,
84% cov

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

26% id,
83% cov

AGT2_HUMAN / Q9BYV1: Alanine--glyoxylate aminotransferase 2, mitochondrial; AGT 2; (R)-3-amino-2-methylpropionate--pyruvate transaminase; Beta-ALAAT II; Beta-alanine-pyruvate aminotransferase; D-3-aminoisobutyrate-pyruvate aminotransferase; D-AIBAT; D-beta-aminoisobutyrate-pyruvate aminotransferase; EC 2.6.1.44; EC 2.6.1.40; EC 2.6.1.18 from Homo sapiens
AGXT2 / Q9BYV1: alanine--glyoxylate aminotransferase 2, mitochondrial (EC 2.6.1.44) from Homo sapiens
Q9BYV1: alanine-glyoxylate transaminase (EC 2.6.1.44) from Homo sapiens

33% id,
42% cov

More...

Psest_0535: glutamate-1-semialdehyde-2,1-aminomutase
is similar to:
PaperBLAST

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana

29% id,
77% cov

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

27% id,
67% cov

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

26% id,
67% cov

More...

Psest_4091: diaminobutyrate--2-oxoglutarate aminotransferase
is similar to:
PaperBLAST

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana

27% id,
83% cov

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

25% id,
87% cov

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

25% id,
86% cov

Psest_1985: histidinol-phosphate aminotransferase
is similar to:
PaperBLAST

aspC / Q4FNY9: alanine—glyoxylate transaminase (EC 2.6.1.44) from Pelagibacter ubique

23% id,
95% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

587991-589418 (frame -2) on Psest_Contig47.1
is similar to:
PaperBLAST

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana
Also see hits to annotated proteins above

28% id,
89% cov

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana
Also see hits to annotated proteins above

24% id,
81% cov

AGT2_RAT / Q64565: Alanine--glyoxylate aminotransferase 2, mitochondrial; AGT 2; (R)-3-amino-2-methylpropionate--pyruvate transaminase; Beta-ALAAT II; Beta-alanine-pyruvate aminotransferase; D-3-aminoisobutyrate-pyruvate aminotransferase; D-AIBAT; D-beta-aminoisobutyrate-pyruvate aminotransferase; EC 2.6.1.44; EC 2.6.1.40; EC 2.6.1.18 from Rattus norvegicus
Q64565: (R)-3-amino-2-methylpropionate-pyruvate transaminase (EC 2.6.1.40); alanine-glyoxylate transaminase (EC 2.6.1.44) from Rattus norvegicus
Also see hits to annotated proteins above

28% id,
38% cov

4267240-4268730 (frame +1) on Psest_Contig47.1
is similar to:
PaperBLAST

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana
Also see hits to annotated proteins above

25% id,
90% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory