Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 33 curated entries in PaperBLAST's database that match '2.6.1.57'.

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 14 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_0779: Aspartate/tyrosine/aromatic aminotransferase
is similar to:
PaperBLAST

Psest_0779: tyrosine aminotransferase (EC 2.6.1.57) from Pseudomonas stutzeri

100% id,
100% cov

AO353_18575: tyrosine aminotransferase (EC 2.6.1.57) from Pseudomonas fluorescens

73% id,
99% cov

PfGW456L13_4396: tyrosine aminotransferase (EC 2.6.1.57) from Pseudomonas fluorescens

72% id,
99% cov

More...

Psest_1985: histidinol-phosphate aminotransferase
is similar to:
PaperBLAST

BPHYT_RS14905: Aromatic-amino-acid transaminase (EC 2.6.1.57) from Burkholderia phytofirmans

54% id,
97% cov

Psest_1295: Aspartate/tyrosine/aromatic aminotransferase
is similar to:
PaperBLAST

RR42_RS33490: Aromatic-amino-acid aminotransferase (EC 2.6.1.57) from Cupriavidus basilensis

53% id,
99% cov

TYRB_ECOLI / P04693: Aromatic-amino-acid aminotransferase; ARAT; AROAT; Beta-methylphenylalanine transaminase; EC 2.6.1.57; EC 2.6.1.107 from Escherichia coli
TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli
tyrB / GB|AAC77024.1: aromatic-amino-acid transaminase TyrB; EC 2.6.1.57 from Escherichia coli
tyrB / P04693: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.1) from Escherichia coli

52% id,
100% cov

TYRB_KLEPN / O85746: Tyrosine aminotransferase; TyrAT; Aromatic-amino-acid transaminase; Aspartate aminotransferase; EC 2.6.1.5; EC 2.6.1.57; EC 2.6.1.1 from Klebsiella pneumoniae

51% id,
100% cov

More...

Psest_0450: branched-chain amino acid aminotransferase, group I
is similar to:
PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

48% id,
95% cov

Psest_1990: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
is similar to:
PaperBLAST

Ac3H11_1015: Aromatic-amino-acid aminotransferase (EC 2.6.1.57) from Acidovorax sp.

36% id,
100% cov

ARAT1_THELN / H3ZPL1: Aromatic-amino-acid aminotransferase 1; ARAT-I; AROAT; EC 2.6.1.57 from Thermococcus litoralis

37% id,
95% cov

AATR2_SCHPO / O94570: Aromatic amino acid aminotransferase C1773.13; EC 2.6.1.57 from Schizosaccharomyces pombe

25% id,
77% cov

More...

Psest_3297: histidinol-phosphate aminotransferase
is similar to:
PaperBLAST

BPHYT_RS14905: Aromatic-amino-acid transaminase (EC 2.6.1.57) from Burkholderia phytofirmans

35% id,
98% cov

Psest_1004: Aspartate/tyrosine/aromatic aminotransferase
is similar to:
PaperBLAST

Q9RAT0: aromatic-amino-acid transaminase (EC 2.6.1.57) from Lactococcus lactis

33% id,
94% cov

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

32% id,
92% cov

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

29% id,
99% cov

More...

Psest_1772: Aspartate/tyrosine/aromatic aminotransferase
is similar to:
PaperBLAST

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

32% id,
92% cov

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

31% id,
92% cov

Q9RAT0: aromatic-amino-acid transaminase (EC 2.6.1.57) from Lactococcus lactis

30% id,
91% cov

More...

Psest_1710: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
is similar to:
PaperBLAST

ARAT1_THELN / H3ZPL1: Aromatic-amino-acid aminotransferase 1; ARAT-I; AROAT; EC 2.6.1.57 from Thermococcus litoralis

32% id,
91% cov

Ac3H11_1015: Aromatic-amino-acid aminotransferase (EC 2.6.1.57) from Acidovorax sp.

26% id,
97% cov

AATR3_SCHPO / Q9Y7S6: Aromatic amino acid aminotransferase C569.07; EC 2.6.1.57 from Schizosaccharomyces pombe

27% id,
69% cov

More...

Psest_1268: Aspartate/tyrosine/aromatic aminotransferase
is similar to:
PaperBLAST

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

30% id,
97% cov

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

30% id,
91% cov

bacF / P39643: 3-[(2S,5R)-5-hydroxy-7-oxabicyclo[4.1.0]heptan-2-yl]-2-oxopropanoate aminotransferase (EC 2.6.1.57) from Bacillus subtilis

27% id,
94% cov

Psest_1470: succinyldiaminopimelate transaminase
is similar to:
PaperBLAST

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

26% id,
98% cov

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

26% id,
98% cov

bacF / P39643: 3-[(2S,5R)-5-hydroxy-7-oxabicyclo[4.1.0]heptan-2-yl]-2-oxopropanoate aminotransferase (EC 2.6.1.57) from Bacillus subtilis

28% id,
91% cov

More...

Psest_1570: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
is similar to:
PaperBLAST

ARAT1_THELN / H3ZPL1: Aromatic-amino-acid aminotransferase 1; ARAT-I; AROAT; EC 2.6.1.57 from Thermococcus litoralis

29% id,
88% cov

Ac3H11_1015: Aromatic-amino-acid aminotransferase (EC 2.6.1.57) from Acidovorax sp.

28% id,
87% cov

AATR1_SCHPO / O14192: Aromatic amino acid aminotransferase C56E4.03; EC 2.6.1.57 from Schizosaccharomyces pombe

25% id,
93% cov

More...

Psest_0649: Glutamate decarboxylase and related PLP-dependent proteins
is similar to:
PaperBLAST

H7CE71: aromatic-amino-acid transaminase (EC 2.6.1.57) from Rosa hybrid

26% id,
84% cov

Psest_3009: L-threonine-O-3-phosphate decarboxylase
is similar to:
PaperBLAST

BPHYT_RS14905: Aromatic-amino-acid transaminase (EC 2.6.1.57) from Burkholderia phytofirmans

28% id,
77% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 14 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

495968-497089 (frame +2) on Psest_Contig47.1
is similar to:
PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
Also see hits to annotated proteins above

47% id,
98% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory