Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 75 curated entries in PaperBLAST's database that match '2.6.1.9'.

These curated entries have 51 distinct sequences.

Running ublast with E ≤ 0.01

Found 17 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_3297: histidinol-phosphate aminotransferase
is similar to:
PaperBLAST

Psest_3297: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas stutzeri

100% id,
100% cov

PP_0967: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas putida

83% id,
100% cov

Pf6N2E2_3251: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas fluorescens

81% id,
99% cov

More...

Psest_1985: histidinol-phosphate aminotransferase
is similar to:
PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

44% id,
98% cov

AZOBR_RS20485: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Azospirillum brasilense

40% id,
97% cov

PGA1_c25240: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Phaeobacter inhibens

41% id,
93% cov

More...

Psest_4285: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
is similar to:
PaperBLAST

GATP2_SOLLC / Q84P53: Gamma aminobutyrate transaminase 2; Gamma-aminobutyrate transaminase isozyme 2; LeGABA-TP2; SlGABA-T2; EC 2.6.1.96 from Solanum lycopersicum
GABA-TP2 / Q84P53: gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum
Q84P53: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum

44% id,
95% cov

GATP4_ORYSJ / Q6ZH29: Probable gamma-aminobutyrate transaminase 4; OsGABA-T; EC 2.6.1.96 from Oryza sativa
Q6ZH29: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa

43% id,
92% cov

Q7XN12: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa

45% id,
88% cov

More...

Psest_1811: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase
is similar to:
PaperBLAST

PSEC_CAMJJ / Q5QKR7: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase; Pseudaminic acid biosynthesis protein C; EC 2.6.1.92 from Campylobacter jejuni

37% id,
94% cov

PSEC_CAMJE / Q0P8W3: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase; Pseudaminic acid biosynthesis protein C; EC 2.6.1.92 from Campylobacter jejuni

36% id,
94% cov

YfbE / b2253: UDP-4-amino-4-deoxy-L-arabinose aminotransferase (EC 2.6.1.92; EC 2.6.1.87) from Escherichia coli
arnB / P77690: UDP-4-amino-4-deoxy-L-arabinose aminotransferase (EC 2.6.1.92) from Escherichia coli

35% id,
97% cov

More...

Psest_4306: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
is similar to:
PaperBLAST

GATP2_SOLLC / Q84P53: Gamma aminobutyrate transaminase 2; Gamma-aminobutyrate transaminase isozyme 2; LeGABA-TP2; SlGABA-T2; EC 2.6.1.96 from Solanum lycopersicum
GABA-TP2 / Q84P53: gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum
Q84P53: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum

34% id,
94% cov

GATP4_ORYSJ / Q6ZH29: Probable gamma-aminobutyrate transaminase 4; OsGABA-T; EC 2.6.1.96 from Oryza sativa
Q6ZH29: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa

34% id,
91% cov

Q7XN12: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa

33% id,
87% cov

More...

Psest_2600: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
is similar to:
PaperBLAST

B2RK60: UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase (EC 2.6.1.98) from Porphyromonas gingivalis

31% id,
97% cov

WBPE_PSEAE / Q9HZ76: UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase; UDP-3-oxo-D-GlcNAcA aminotransferase; UDP-2-acetamido-2-deoxy-alpha-D-ribo-hex-3-uluronic acid transaminase; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase; EC 2.6.1.98 from Pseudomonas aeruginosa
wbpE / Q9HZ76: UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase (EC 2.6.1.98) from Pseudomonas aeruginosa
Q9HZ76: UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase (EC 2.6.1.98) from Pseudomonas aeruginosa

31% id,
92% cov

YfbE / b2253: UDP-4-amino-4-deoxy-L-arabinose aminotransferase (EC 2.6.1.92; EC 2.6.1.87) from Escherichia coli
arnB / P77690: UDP-4-amino-4-deoxy-L-arabinose aminotransferase (EC 2.6.1.92) from Escherichia coli

30% id,
93% cov

More...

Psest_0306: adenosylmethionine-8-amino-7-oxononanoate transaminase
is similar to:
PaperBLAST

GATP2_SOLLC / Q84P53: Gamma aminobutyrate transaminase 2; Gamma-aminobutyrate transaminase isozyme 2; LeGABA-TP2; SlGABA-T2; EC 2.6.1.96 from Solanum lycopersicum
GABA-TP2 / Q84P53: gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum
Q84P53: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum

30% id,
96% cov

GATP4_ORYSJ / Q6ZH29: Probable gamma-aminobutyrate transaminase 4; OsGABA-T; EC 2.6.1.96 from Oryza sativa
Q6ZH29: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa

29% id,
93% cov

GATP3_SOLLC / Q84P52: Gamma aminobutyrate transaminase 3, chloroplastic; Gamma-aminobutyrate transaminase isozyme 3; LeGABA-TP3; SlGABA-T3; EC 2.6.1.96 from Solanum lycopersicum
Q84P52: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum

32% id,
80% cov

More...

Psest_2719: acetylornithine and succinylornithine aminotransferases/succinylornithine transaminase family
is similar to:
PaperBLAST

GATP4_ORYSJ / Q6ZH29: Probable gamma-aminobutyrate transaminase 4; OsGABA-T; EC 2.6.1.96 from Oryza sativa
Q6ZH29: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa

30% id,
92% cov

GATP1_SOLLC / Q84P54: Gamma aminobutyrate transaminase 1, mitochondrial; Gamma-aminobutyrate transaminase isozyme 1; LeGABA-TP1; SlGABA-T1; EC 2.6.1.96 from Solanum lycopersicum
GABA-TP1 / Q84P54: gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum
Q84P54: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum

29% id,
82% cov

KACL_STRKN / Q6L741: 2'-deamino-2'-hydroxyneamine transaminase; Kanamycin biosynthesis protein B; Neamine transaminase KanB; EC 2.6.1.94; EC 2.6.1.93 from Streptomyces kanamyceticus
kacL / Q6L741: glutamate--6'-dehydroparomanine aminotransferase (EC 2.6.1.94; EC 2.6.1.93) from Streptomyces kanamyceticus

25% id,
90% cov

More...

Psest_3653: 4-aminobutyrate aminotransferase, prokaryotic type
is similar to:
PaperBLAST

GATP4_ORYSJ / Q6ZH29: Probable gamma-aminobutyrate transaminase 4; OsGABA-T; EC 2.6.1.96 from Oryza sativa
Q6ZH29: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa

28% id,
87% cov

Q7XN12: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa

28% id,
85% cov

GATP_ARATH / Q94CE5: Gamma-aminobutyrate transaminase POP2, mitochondrial; AtGABA-T; Gamma-aminobutyric acid aminotransferase 1; Protein HEXENAL RESPONSE 1; Protein POLLEN-PISTIL INCOMPATIBILITY 2; AtPOP2; EC 2.6.1.96 from Arabidopsis thaliana
POP2 / Q94CE5: γ-aminobutyrate transaminase (pyruvate dependent) (EC 2.6.1.96) from Arabidopsis thaliana
Q94CE5: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Arabidopsis thaliana

25% id,
84% cov

More...

Psest_3009: L-threonine-O-3-phosphate decarboxylase
is similar to:
PaperBLAST

AZOBR_RS20485: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Azospirillum brasilense

24% id,
93% cov

DvMF_0908: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Desulfovibrio vulgaris

32% id,
70% cov

PGA1_c25240: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Phaeobacter inhibens

24% id,
92% cov

More...

Psest_1268: Aspartate/tyrosine/aromatic aminotransferase
is similar to:
PaperBLAST

AZOBR_RS20485: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Azospirillum brasilense

24% id,
92% cov

HIS8_ZYMMO / P34037: Histidinol-phosphate aminotransferase; Imidazole acetol phosphate aminotransferase; IAP aminotransferase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9 from Zymomonas mobilis

25% id,
59% cov

WBPE_PSEAE / Q9HZ76: UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase; UDP-3-oxo-D-GlcNAcA aminotransferase; UDP-2-acetamido-2-deoxy-alpha-D-ribo-hex-3-uluronic acid transaminase; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase; EC 2.6.1.98 from Pseudomonas aeruginosa
wbpE / Q9HZ76: UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase (EC 2.6.1.98) from Pseudomonas aeruginosa
Q9HZ76: UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase (EC 2.6.1.98) from Pseudomonas aeruginosa

31% id,
28% cov

More...

Psest_4091: diaminobutyrate--2-oxoglutarate aminotransferase
is similar to:
PaperBLAST

GATP2_SOLLC / Q84P53: Gamma aminobutyrate transaminase 2; Gamma-aminobutyrate transaminase isozyme 2; LeGABA-TP2; SlGABA-T2; EC 2.6.1.96 from Solanum lycopersicum
GABA-TP2 / Q84P53: gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum
Q84P53: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum

24% id,
91% cov

GATP3_SOLLC / Q84P52: Gamma aminobutyrate transaminase 3, chloroplastic; Gamma-aminobutyrate transaminase isozyme 3; LeGABA-TP3; SlGABA-T3; EC 2.6.1.96 from Solanum lycopersicum
Q84P52: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum

24% id,
82% cov

GATP1_SOLLC / Q84P54: Gamma aminobutyrate transaminase 1, mitochondrial; Gamma-aminobutyrate transaminase isozyme 1; LeGABA-TP1; SlGABA-T1; EC 2.6.1.96 from Solanum lycopersicum
GABA-TP1 / Q84P54: gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum
Q84P54: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum

23% id,
81% cov

More...

Psest_2578: O-succinylhomoserine sulfhydrylase
is similar to:
PaperBLAST

PGA1_c25240: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Phaeobacter inhibens

27% id,
61% cov

Psest_1470: succinyldiaminopimelate transaminase
is similar to:
PaperBLAST

his3 / GI|1174375: histidinol-phosphate aminotransferase imidazole acetol phosphate transaminase His3; EC 2.6.1.9 from Schizosaccharomyces pombe

26% id,
62% cov

Psest_1772: Aspartate/tyrosine/aromatic aminotransferase
is similar to:
PaperBLAST

AZOBR_RS20485: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Azospirillum brasilense

27% id,
57% cov

Psest_1506: queuosine biosynthesis protein QueC
is similar to:
PaperBLAST

Q981C9: archaeosine synthase (EC 2.6.1.97) from Saccharolobus solfataricus

30% id,
48% cov

Psest_3927: thiazole biosynthesis/tRNA modification protein ThiI
is similar to:
PaperBLAST

Q981C9: archaeosine synthase (EC 2.6.1.97) from Saccharolobus solfataricus

26% id,
39% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2780861-2782174 (frame +2) on Psest_Contig47.1
is similar to:
PaperBLAST

B2RK60: UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase (EC 2.6.1.98) from Porphyromonas gingivalis
Also see hits to annotated proteins above

31% id,
99% cov

WBPE_PSEAE / Q9HZ76: UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase; UDP-3-oxo-D-GlcNAcA aminotransferase; UDP-2-acetamido-2-deoxy-alpha-D-ribo-hex-3-uluronic acid transaminase; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase; EC 2.6.1.98 from Pseudomonas aeruginosa
wbpE / Q9HZ76: UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase (EC 2.6.1.98) from Pseudomonas aeruginosa
Q9HZ76: UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase (EC 2.6.1.98) from Pseudomonas aeruginosa
Also see hits to annotated proteins above

30% id,
96% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory