Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 29 curated entries in PaperBLAST's database that match '2.7.1.17' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_2773: glycerol kinase
is similar to:
PaperBLAST

C7NMH3: xylulokinase (EC 2.7.1.17) from Halorhabdus utahensis

28% id,
93% cov

XYLB_LEVBR / P35850: Xylulose kinase; Xylulokinase; EC 2.7.1.17 from Levilactobacillus brevis

23% id,
98% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory