Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 472 curated entries in PaperBLAST's database that match '2.7.1.2'.

These curated entries have 315 distinct sequences.

Running ublast with E ≤ 0.01

Found 20 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_0454: Lipopolysaccharide kinase (Kdo/WaaP) family.
is similar to:
PaperBLAST

WAAP_PSEAE / Q9HUF7: Lipopolysaccharide core heptose(I) kinase WaaP; Eukaryotic-type protein tyrosine kinase WaaP; Lipopolysaccharide heptose kinase WaaP; LPS heptose kinase WaaP; EC 2.7.1.235; EC 2.7.10.2 from Pseudomonas aeruginosa
Q9HUF7: lipopolysaccharide core heptose(I) kinase (EC 2.7.1.235) from Pseudomonas aeruginosa

80% id,
100% cov

WAAP_ECOLX / Q9R9D6: Lipopolysaccharide core heptose(I) kinase WaaP; EC 2.7.1.235 from Escherichia coli
Q9R9D6: lipopolysaccharide core heptose(I) kinase (EC 2.7.1.235) from Escherichia coli

56% id,
98% cov

waaP / P25741: lipopolysaccharide core heptose (I) kinase (EC 2.7.1.235) from Escherichia coli

55% id,
98% cov

More...

Psest_3664: Predicted phosphotransferase related to Ser/Thr protein kinases
is similar to:
PaperBLAST

AMGK_PSEAE / Q9I5U1: N-acetylmuramate/N-acetylglucosamine kinase; MurNAc/GlcNAc kinase; Anomeric sugar kinase; EC 2.7.1.221 from Pseudomonas aeruginosa

70% id,
99% cov

AMGK_PSEPK / Q88QT3: N-acetylmuramate/N-acetylglucosamine kinase; MurNAc/GlcNAc kinase; Anomeric sugar kinase; EC 2.7.1.221 from Pseudomonas putida
amgK / Q88QT3: N-acetyl-D-muramate 1-kinase (EC 2.7.1.162; EC 2.7.1.221) from Pseudomonas putida
Q88QT3: N-acetylmuramate 1-kinase (EC 2.7.1.221) from Pseudomonas putida

69% id,
100% cov

AMGK_NEIMB / Q9K188: N-acetylmuramate/N-acetylglucosamine kinase; MurNAc/GlcNAc kinase; EC 2.7.1.221 from Neisseria meningitidis

45% id,
96% cov

More...

Psest_0850: glucokinase, proteobacterial type
is similar to:
PaperBLAST

PS417_22685: Glucokinase (EC 2.7.1.2) from Pseudomonas simiae

63% id,
100% cov

GLK_ECOLI / P0A6V8: Glucokinase; Glucose kinase; EC 2.7.1.2 from Escherichia coli
Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli

39% id,
99% cov

Dshi_1655: glucokinase (EC 2.7.1.2) from Dinoroseobacter shibae

36% id,
96% cov

More...

Psest_1893: glucokinase, proteobacterial type
is similar to:
PaperBLAST

PS417_22685: Glucokinase (EC 2.7.1.2) from Pseudomonas simiae

62% id,
99% cov

GLK_ECOLI / P0A6V8: Glucokinase; Glucose kinase; EC 2.7.1.2 from Escherichia coli
Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli

43% id,
98% cov

Dshi_1655: glucokinase (EC 2.7.1.2) from Dinoroseobacter shibae

31% id,
97% cov

More...

Psest_3353: PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIC component
is similar to:
PaperBLAST

PTFBC_VIBCH / Q9KM72: PTS system fructose-specific EIIB'BC component; EC 2.7.1.202 from Vibrio cholerae

61% id,
98% cov

PTFBC_ECOLI / P20966: PTS system fructose-specific EIIB'BC component; EIIB'BC-Fru; EC 2.7.1.202 from Escherichia coli

58% id,
99% cov

PTFBC_XANCP / P23355: PTS system fructose-specific EIIB'BC component; EIIB'BC-Fru; EC 2.7.1.202 from Xanthomonas campestris

51% id,
98% cov

More...

Psest_3380: riboflavin kinase/FMN adenylyltransferase
is similar to:
PaperBLAST

YaaC / b0025: bifunctional riboflavin kinase / FMN adenylyltransferase (EC 2.7.1.26; EC 2.7.7.2) from Escherichia coli
ribF / P0AG40: bifunctional riboflavin kinase / FMN adenylyltransferase (EC 2.7.1.26; EC 2.7.7.2) from Escherichia coli

55% id,
98% cov

ribCF / A3FM23: bifunctional riboflavin kinase/FAD synthase (EC 2.7.1.26; EC 2.7.7.2) from Streptomyces davaonensis
A3FM23: riboflavin kinase (EC 2.7.1.26) from Streptomyces davaonensis

38% id,
98% cov

RIBF_GEOTN / A4IT50: Putative bifunctional riboflavin kinase/FMN adenylyltransferase; Putative riboflavin biosynthesis protein RibF; EC 2.7.1.26; EC 2.7.7.2 from Geobacillus thermodenitrificans

36% id,
92% cov

More...

Psest_3293: sulfate adenylyltransferase, large subunit
is similar to:
PaperBLAST

CYSNC_MYCTU / P9WNM5: Bifunctional enzyme CysN/CysC; EC 2.7.7.4; EC 2.7.1.25 from Mycobacterium tuberculosis
P9WNM5: adenylyl-sulfate kinase (EC 2.7.1.25) from Mycobacterium tuberculosis

49% id,
99% cov

CYSC_ECOLI / P0A6J1: Adenylyl-sulfate kinase; APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase; EC 2.7.1.25 from Escherichia coli
CysC / b2750: adenylyl-sulfate kinase (EC 2.7.1.25) from Escherichia coli
cysC / P0A6J1: adenylyl-sulfate kinase (EC 2.7.1.25) from Escherichia coli

39% id,
92% cov

CYSC1_BACSU / O34577: Probable adenylyl-sulfate kinase; APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase; EC 2.7.1.25 from Bacillus subtilis

38% id,
94% cov

More...

Psest_1917: Predicted sugar kinase
is similar to:
PaperBLAST

NADK_ECOLI / P0A7B3: NAD kinase; ATP-dependent NAD kinase; EC 2.7.1.23 from Escherichia coli
YfjE / b2615: NAD kinase (EC 2.7.1.23) from Escherichia coli
P0A7B3: NAD+ kinase (EC 2.7.1.23) from Archaeoglobus fulgidus

48% id,
99% cov

NADK_SALTY / P65774: NAD kinase; ATP-dependent NAD kinase; EC 2.7.1.23 from Salmonella typhimurium

47% id,
99% cov

NADK_YERPE / Q8ZH09: NAD kinase; ATP-dependent NAD kinase; EC 2.7.1.23 from Yersinia pestis

47% id,
99% cov

More...

Psest_3285: dephospho-CoA kinase
is similar to:
PaperBLAST

COAE_ECOLI / P0A6I9: Dephospho-CoA kinase; Dephosphocoenzyme A kinase; EC 2.7.1.24 from Escherichia coli
YacE / b0103: dephospho-CoA kinase (EC 2.7.1.24) from Escherichia coli
coaE / P0A6I9: dephospho-CoA kinase (EC 2.7.1.24) from Escherichia coli
P0A6I9: dephospho-CoA kinase (EC 2.7.1.24) from Escherichia coli

49% id,
94% cov

Q5ZVH3: dephospho-CoA kinase (EC 2.7.1.24) from Legionella pneumophila

42% id,
96% cov

D5MBE3: dephospho-CoA kinase (EC 2.7.1.24) from Streptomyces peucetius

39% id,
91% cov

More...

Psest_2316: phosphoenolpyruvate synthase
is similar to:
PaperBLAST

Tharo_2775 / A0A2R4BQP6: phenylphosphate synthase subunit B (EC 2.7.1.238) from Thauera aromatica

43% id,
94% cov

Tharo_2774 / A0A2R4BQP1: phenylphosphate synthase subunit A (EC 2.7.1.238) from Thauera aromatica

35% id,
16% cov

Psest_2773: glycerol kinase
is similar to:
PaperBLAST

APLK_PECAS / Q6D5T8: Apulose kinase; EC 2.7.1.233 from Pectobacterium atrosepticum
aplK / Q6D5T8: apulose kinase (EC 2.7.1.233) from Pectobacterium atrosepticum
Q6D5T8: apulose kinase (EC 2.7.1.233) from Pectobacterium atrosepticum

40% id,
98% cov

Psest_3354: 1-phosphofructokinase
is similar to:
PaperBLAST

tagK / Q65EY9: D-tagatose-1-phosphate kinase (EC 2.7.1.234) from Bacillus licheniformis
Q65EY9: D-tagatose-1-phosphate kinase (EC 2.7.1.234) from Bacillus licheniformis

31% id,
100% cov

Q8VS15: D-tagatose-1-phosphate kinase (EC 2.7.1.234) from Klebsiella oxytoca

27% id,
100% cov

R1PK_THEKO / Q5JDG9: ADP-dependent ribose-1-phosphate kinase; ADP-R1P kinase; ADP:alpha-D-ribose-1-phosphate 5-phosphotransferase; Alpha-D-ribose-1-phosphate 5-kinase (ADP); EC 2.7.1.212 from Thermococcus kodakarensis
TK2029 / Q5JDG9: α-D-ribose-1-phosphate 5-kinase (ADP) (EC 2.7.1.212) from Thermococcus kodakarensis

24% id,
79% cov

More...

Psest_3637: Predicted molecular chaperone distantly related to HSP70-fold metalloproteases
is similar to:
PaperBLAST

LGK_LIPST / B3VI55: Levoglucosan kinase; LGK; EC 2.7.1.232 from Lipomyces starkeyi
LGK / B3VI55: levoglucosan kinase (EC 2.7.1.232) from Lipomyces starkeyi
B3VI55: levoglucosan kinase (EC 2.7.1.232) from Lipomyces starkeyi

31% id,
87% cov

Psest_1933: hexose kinase, 1-phosphofructokinase family
is similar to:
PaperBLAST

tagK / Q65EY9: D-tagatose-1-phosphate kinase (EC 2.7.1.234) from Bacillus licheniformis
Q65EY9: D-tagatose-1-phosphate kinase (EC 2.7.1.234) from Bacillus licheniformis

28% id,
97% cov

AIRSK_SALTY / Q8ZKR2: Aminoimidazole riboside kinase; AIRs kinase; EC 2.7.1.223 from Salmonella typhimurium
STM4066 / Q8ZKR2: aminoimidazole riboside kinase (EC 2.7.1.223) from Salmonella typhimurium
Q8ZKR2: aminoimidazole riboside kinase (EC 2.7.1.223) from Salmonella enterica

27% id,
49% cov

FRLD_ECOLI / P45543: Fructoselysine 6-kinase; EC 2.7.1.218 from Escherichia coli
YhfQ / b3374: fructoselysine 6-kinase (EC 2.7.1.218) from Escherichia coli
frlD / P45543: fructoselysine 6-kinase (EC 2.7.1.218) from Escherichia coli
P45543: fructoselysine 6-kinase (EC 2.7.1.218) from Escherichia coli

31% id,
37% cov

Psest_3355: phosphoenolpyruvate-protein phosphotransferase
is similar to:
PaperBLAST

P37349: phosphoenolpyruvate-glycerone phosphotransferase (subunit 1/3) (EC 2.7.1.121); glycerone kinase (EC 2.7.1.29) from Escherichia coli

25% id,
78% cov

Psest_3608: translation elongation factor TU
is similar to:
PaperBLAST

CYSNC_MYCTU / P9WNM5: Bifunctional enzyme CysN/CysC; EC 2.7.7.4; EC 2.7.1.25 from Mycobacterium tuberculosis
P9WNM5: adenylyl-sulfate kinase (EC 2.7.1.25) from Mycobacterium tuberculosis

25% id,
49% cov

Psest_3622: translation elongation factor TU
is similar to:
PaperBLAST

CYSNC_MYCTU / P9WNM5: Bifunctional enzyme CysN/CysC; EC 2.7.7.4; EC 2.7.1.25 from Mycobacterium tuberculosis
P9WNM5: adenylyl-sulfate kinase (EC 2.7.1.25) from Mycobacterium tuberculosis

25% id,
49% cov

Psest_1247: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
is similar to:
PaperBLAST

NPPNK_METJA / Q58327: Bifunctional NADP phosphatase/NAD kinase; EC 2.7.1.23; EC 3.1.3.- from Methanocaldococcus jannaschii
Q58327: NAD+ kinase (EC 2.7.1.23); nocturnin (EC 3.1.3.108); fructose-bisphosphatase (EC 3.1.3.11) from Methanocaldococcus jannaschii

25% id,
43% cov

Psest_3862: phosphoenolpyruvate-protein phosphotransferase
is similar to:
PaperBLAST

P37349: phosphoenolpyruvate-glycerone phosphotransferase (subunit 1/3) (EC 2.7.1.121); glycerone kinase (EC 2.7.1.29) from Escherichia coli

26% id,
37% cov

Psest_3419: Predicted transcriptional regulators
is similar to:
PaperBLAST

NADR_ECOLI / P27278: Trifunctional NAD biosynthesis/regulator protein NadR; EC 2.7.7.1; EC 2.7.1.22 from Escherichia coli
NadR / b4390: DNA-binding transcriptional repressor/NMN adenylyltransferase NadR (EC 2.7.7.1; EC 2.7.1.22) from Escherichia coli
NadR / P27278: DNA-binding transcriptional repressor/NMN adenylyltransferase NadR (EC 2.7.7.1; EC 2.7.1.22) from Escherichia coli

29% id,
31% cov

NADR_SALTY / P24518: Trifunctional NAD biosynthesis/regulator protein NadR; EC 2.7.7.1; EC 2.7.1.22 from Salmonella typhimurium

29% id,
31% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 19 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory