Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 53 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_3109: Enoyl-CoA hydratase/carnithine racemase
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

28% id,
98% cov

Psest_3354: 1-phosphofructokinase
is similar to:
PaperBLAST

Pf6N2E2_1965: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

28% id,
93% cov

AO356_00035: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

28% id,
85% cov

BPHYT_RS02045: Fructokinase (EC 2.7.1.4) from Burkholderia phytofirmans

26% id,
84% cov

More...

Psest_2720: Enoyl-CoA hydratase/carnithine racemase
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

28% id,
89% cov

Psest_2076: Enoyl-CoA hydratase/carnithine racemase
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

26% id,
99% cov

Psest_2654: fatty oxidation complex, alpha subunit FadB
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

23% id,
98% cov

Psest_4235: 3-hydroxyacyl-CoA dehydrogenase
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

30% id,
72% cov

Psest_1933: hexose kinase, 1-phosphofructokinase family
is similar to:
PaperBLAST

Q9LNE4: fructokinase (EC 2.7.1.4) from Arabidopsis thaliana

22% id,
83% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory