Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 37 curated entries in PaperBLAST's database that match '3.5.1.25'.

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_1208: guanine deaminase
is similar to:
PaperBLAST

A0A3E2N0G4: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Mycobacterium marinum

32% id,
22% cov

Q8DN83: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Streptococcus pneumoniae

36% id,
15% cov

Psest_2003: Cytosine deaminase and related metal-dependent hydrolases
is similar to:
PaperBLAST

Sama_0946: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella amazonensis

32% id,
21% cov

BAA22834.1: N-acetylglucosamine 6-phosphate deacetylase (NagA) (EC 3.5.1.25)

35% id,
18% cov

NAGA_VIBCH / O32445: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Vibrio cholerae
nagA / O32445: N-acetylglucosamine-6-phosphate deacetylase subunit (EC 3.5.1.25) from Vibrio cholerae

35% id,
18% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory