Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 31 curated entries in PaperBLAST's database that match '3.5.99.6'.

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_4349: glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
is similar to:
PaperBLAST

AO353_04455: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Pseudomonas fluorescens

31% id,
99% cov

BPHYT_RS02735: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Burkholderia phytofirmans

31% id,
99% cov

Shewana3_3113: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella sp.

30% id,
99% cov

More...

Psest_0853: 6-phosphogluconolactonase
is similar to:
PaperBLAST

GPI1 / O97439: glucosamine 6-phosphate isomerase 1 (EC 3.5.99.6) from Giardia intestinalis

24% id,
76% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory