Searching in Pseudomonas stutzeri RCH2 (psRCH2)
Found 15 curated entries in PaperBLAST's database that match '4.1.1.43' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Pseudomonas stutzeri RCH2, or try another query
| Psest_2218: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit is similar to: | PaperBLAST |
ppdcβ / G1UHX5: phenylpyruvate decarboxylase β subunit (EC 4.1.1.43) from Streptomyces virginiae | 42% id, 98% cov |
| Psest_1427: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit is similar to: | PaperBLAST |
ppdcβ / G1UHX5: phenylpyruvate decarboxylase β subunit (EC 4.1.1.43) from Streptomyces virginiae | 37% id, 98% cov |
| Psest_1429: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit is similar to: | PaperBLAST |
ppdcα / A0A222AKA3: phenylpyruvate decarboxylase α subunit (EC 4.1.1.43) from Streptomyces virginiae | 35% id, 75% cov |
| Psest_2219: pyruvate dehydrogenase E1 component, alpha subunit is similar to: | PaperBLAST |
ppdcα / A0A222AKA3: phenylpyruvate decarboxylase α subunit (EC 4.1.1.43) from Streptomyces virginiae | 31% id, 85% cov |
| Psest_1036: acetolactate synthase, large subunit, biosynthetic type is similar to: | PaperBLAST |
ipdC / P51852: phenylpyruvate decarboxylase (EC 4.1.1.43) from Azospirillum brasilense | 27% id, 95% cov |
pdc / Q5NYJ8: phenylpyruvate decarboxylase (EC 4.1.1.43) from Aromatoleum aromaticum | 26% id, 95% cov |
| Psest_1181: glyoxylate carboligase is similar to: | PaperBLAST |
pdc / Q5NYJ8: phenylpyruvate decarboxylase (EC 4.1.1.43) from Aromatoleum aromaticum | 27% id, 48% cov |
| Psest_0641: 1-deoxy-D-xylulose-5-phosphate synthase is similar to: | PaperBLAST |
ppdcα / A0A222AKA3: phenylpyruvate decarboxylase α subunit (EC 4.1.1.43) from Streptomyces virginiae | 34% id, 22% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1538028-1539197 (frame -2) on Psest_Contig47.1 is similar to: | PaperBLAST |
ppdcα / A0A222AKA3: phenylpyruvate decarboxylase α subunit (EC 4.1.1.43) from Streptomyces virginiae | 34% id, 84% cov |
| 2368145-2369305 (frame -3) on Psest_Contig47.1 is similar to: | PaperBLAST |
ppdcα / A0A222AKA3: phenylpyruvate decarboxylase α subunit (EC 4.1.1.43) from Streptomyces virginiae | 31% id, 90% cov |
Lawrence Berkeley National Laboratory