Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 6 curated entries in PaperBLAST's database that match '4.1.1.44' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_1394: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
is similar to:
PaperBLAST

Q6SJB9: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Ruegeria pomeroyi

28% id,
95% cov

Psest_3069: 3-oxoadipate enol-lactonase
is similar to:
PaperBLAST

Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii

43% id,
59% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory