Searching in Pseudomonas stutzeri RCH2 (psRCH2)
Found 9 curated entries in PaperBLAST's database that match '4.2.1.40' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Pseudomonas stutzeri RCH2, or try another query
| Psest_0376: glucarate dehydratase is similar to: | PaperBLAST |
GUDD_PSEPU / P42206: Glucarate dehydratase; GDH; GlucD; EC 4.2.1.40 from Pseudomonas putida | 80% id, 98% cov |
GUDD_ECOLI / P0AES2: Glucarate dehydratase; GDH; GlucD; D-glucarate dehydratase; EC 4.2.1.40 from Escherichia coli | 73% id, 99% cov |
GUDD_ACIAD / Q6FFQ2: Glucarate dehydratase; GDH; GlucD; EC 4.2.1.40 from Acinetobacter baylyi | 69% id, 100% cov |
| Psest_0373: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily is similar to: | PaperBLAST |
GUDD_ECOLI / P0AES2: Glucarate dehydratase; GDH; GlucD; D-glucarate dehydratase; EC 4.2.1.40 from Escherichia coli | 63% id, 100% cov |
GUDD_PSEPU / P42206: Glucarate dehydratase; GDH; GlucD; EC 4.2.1.40 from Pseudomonas putida | 64% id, 99% cov |
GUDD_ACIAD / Q6FFQ2: Glucarate dehydratase; GDH; GlucD; EC 4.2.1.40 from Acinetobacter baylyi | 61% id, 100% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory