Searching in Pseudomonas stutzeri RCH2 (psRCH2)
Found 11 curated entries in PaperBLAST's database that match '4.2.1.41' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Pseudomonas stutzeri RCH2, or try another query
| Psest_0374: 5-dehydro-4-deoxyglucarate dehydratase is similar to: | PaperBLAST |
Pf1N1B4_1110: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Pseudomonas fluorescens | 89% id, 100% cov |
PS417_04195: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Pseudomonas simiae | 86% id, 100% cov |
PP_3599: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Pseudomonas putida | 86% id, 100% cov |
| Psest_1515: dihydrodipicolinate synthase is similar to: | PaperBLAST |
KDGD_ACIAD / Q6FFQ1: Probable 5-dehydro-4-deoxyglucarate dehydratase; 5-keto-4-deoxy-glucarate dehydratase; KDGDH; EC 4.2.1.41 from Acinetobacter baylyi | 30% id, 90% cov |
A1VMN2: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Polaromonas naphthalenivorans | 28% id, 96% cov |
B7WZA5: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Comamonas testosteroni | 27% id, 96% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory