Searching in Pseudomonas stutzeri RCH2 (psRCH2)
Found 12 curated entries in PaperBLAST's database that match '4.2.1.43' as complete word(s).
These curated entries have 11 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Pseudomonas stutzeri RCH2, or try another query
| Psest_1515: dihydrodipicolinate synthase is similar to: | PaperBLAST |
HSERO_RS06870: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Herbaspirillum seropedicae | 25% id, 76% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1613777-1614916 (frame +2) on Psest_Contig47.1 is similar to: | PaperBLAST |
BPHYT_RS22715: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Burkholderia phytofirmans | 24% id, 93% cov |
Ac3H11_603: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Acidovorax sp. | 25% id, 79% cov |
KDADA_AZOBR / Q1JUQ0: L-2-keto-3-deoxyarabonate dehydratase; L-KDA dehydratase; 2-dehydro-3-deoxy-L-arabinonate dehydratase; L-2-keto-3-deoxyarabinonate dehydratase; EC 4.2.1.43 from Azospirillum brasilense | 21% id, 86% cov |
Lawrence Berkeley National Laboratory