Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 38 curated entries in PaperBLAST's database that match '4.4.1.5' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_3120: lactoylglutathione lyase
is similar to:
PaperBLAST

Q9HY85: lactoylglutathione lyase (EC 4.4.1.5) from Pseudomonas aeruginosa

71% id,
98% cov

P0A0T3: lactoylglutathione lyase (EC 4.4.1.5) from Neisseria meningitidis

66% id,
94% cov

LGUL_ECOLI / P0AC81: Lactoylglutathione lyase; Aldoketomutase; Glyoxalase I; Glx I; Ketone-aldehyde mutase; Methylglyoxalase; S-D-lactoylglutathione methylglyoxal lyase; EC 4.4.1.5 from Escherichia coli
GloA / b1651: glyoxalase I (EC 4.4.1.5) from Escherichia coli
gloA / RF|NP_416168.1: lactoylglutathione lyase; EC 4.4.1.5 from Shigella flexneri
gloA / P0AC81: lactoylglutathione lyase (EC 4.4.1.5) from Escherichia coli
P0AC81: lactoylglutathione lyase (EC 4.4.1.5) from Escherichia coli

64% id,
96% cov

More...

Psest_2668: Lactoylglutathione lyase and related lyases
is similar to:
PaperBLAST

Q8ZM36: lactoylglutathione lyase (EC 4.4.1.5) from Salmonella enterica

64% id,
86% cov

LGUL_ECOLI / P0AC81: Lactoylglutathione lyase; Aldoketomutase; Glyoxalase I; Glx I; Ketone-aldehyde mutase; Methylglyoxalase; S-D-lactoylglutathione methylglyoxal lyase; EC 4.4.1.5 from Escherichia coli
GloA / b1651: glyoxalase I (EC 4.4.1.5) from Escherichia coli
gloA / RF|NP_416168.1: lactoylglutathione lyase; EC 4.4.1.5 from Shigella flexneri
gloA / P0AC81: lactoylglutathione lyase (EC 4.4.1.5) from Escherichia coli
P0AC81: lactoylglutathione lyase (EC 4.4.1.5) from Escherichia coli

33% id,
90% cov

Q9I5L8: lactoylglutathione lyase (EC 4.4.1.5) from Pseudomonas aeruginosa

33% id,
91% cov

More...

Psest_3195: intracellular protease, PfpI family
is similar to:
PaperBLAST

DJ1D_ARATH / Q9M8R4: Protein DJ-1 homolog D; AtDJ1D; Lactoylglutathione lyase DJ1D; EC 4.4.1.5 from Arabidopsis thaliana

59% id,
50% cov

Psest_0237: intracellular protease, PfpI family
is similar to:
PaperBLAST

DJ1D_ARATH / Q9M8R4: Protein DJ-1 homolog D; AtDJ1D; Lactoylglutathione lyase DJ1D; EC 4.4.1.5 from Arabidopsis thaliana

26% id,
48% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3367196-3367849 (frame -3) on Psest_Contig47.1
is similar to:
PaperBLAST

DJ1D_ARATH / Q9M8R4: Protein DJ-1 homolog D; AtDJ1D; Lactoylglutathione lyase DJ1D; EC 4.4.1.5 from Arabidopsis thaliana
Also see hits to annotated proteins above

52% id,
49% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory