Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 12 curated entries in PaperBLAST's database that match '5.1.99.1' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_4071: 4-hydroxyphenylpyruvate dioxygenase and related hemolysins
is similar to:
PaperBLAST

mcee / A9WGS0: methylmalonyl-CoA epimerase (EC 5.1.99.1) from Chloroflexus aurantiacus

31% id,
80% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory