Curated BLAST for Genomes


Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 4 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_2318: probable AcnD-accessory protein PrpF
is similar to:

Q8EJW4: aconitate DELTA-isomerase (EC from Shewanella oneidensis

76% id,
97% cov

ADI1 / A0A0U2X0E4: aconitate-Δ-isomerase 1 (EC from Ustilago maydis

33% id,
80% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory