Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 1 curated entries in PaperBLAST's database that match '[LysW]-aminoadipate semialdehyde transaminase' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_2719: acetylornithine and succinylornithine aminotransferases/succinylornithine transaminase family
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

42% id,
92% cov

Psest_3653: 4-aminobutyrate aminotransferase, prokaryotic type
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

33% id,
92% cov

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

35% id,
33% cov

Psest_4285: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

30% id,
99% cov

Psest_4306: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

30% id,
93% cov

Psest_4091: diaminobutyrate--2-oxoglutarate aminotransferase
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

30% id,
92% cov

Psest_0535: glutamate-1-semialdehyde-2,1-aminomutase
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

33% id,
79% cov

Psest_0306: adenosylmethionine-8-amino-7-oxononanoate transaminase
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

31% id,
60% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory