Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 24 curated entries in PaperBLAST's database that match '1.1.1.17' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_3038: Multiple polyol-specific dehydrogenase (EC 1.1.1.-)
is similar to:
PaperBLAST

A0A0U4Y4V3: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) from Corynebacterium glutamicum

25% id,
97% cov

MTLD_ASPNG / Q8NJJ1: Mannitol-1-phosphate 5-dehydrogenase; M1PDH; MPD; MPDH; EC 1.1.1.17 from Aspergillus niger

26% id,
67% cov

C7FDI4: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) from Beauveria bassiana

26% id,
68% cov

More...

PfGW456L13_4130: hydrolase, haloacid dehalogenase-like family
is similar to:
PaperBLAST

D0C7J2: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17); mannitol-1-phosphatase (EC 3.1.3.22) from Acinetobacter baumannii

25% id,
32% cov

Q6FBP5: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17); mannitol-1-phosphatase (EC 3.1.3.22) from Acinetobacter baylyi

28% id,
26% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory