Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 30 curated entries in PaperBLAST's database that match '1.1.1.307' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_2401: Methylglyoxal reductase, acetol producing (EC 1.1.1.-) / 2,5-diketo-D-gluconic acid reductase B (EC 1.1.1.274)
is similar to:
PaperBLAST

A0A455KZK8: D-xylose reductase (EC 1.1.1.307) from Thermomyces lanuginosus

33% id,
93% cov

Q7SD67: L-xylulose reductase (EC 1.1.1.10); D-xylose reductase (EC 1.1.1.307) from Neurospora crassa

33% id,
93% cov

G0SCE7: D-xylose reductase (EC 1.1.1.307) from Chaetomium thermophilum

33% id,
94% cov

More...

PfGW456L13_1417: oxidoreductase, aldo/keto reductase family
is similar to:
PaperBLAST

XYL1_PICST / P31867: NAD(P)H-dependent D-xylose reductase; XR; EC 1.1.1.307 from Scheffersomyces stipitis
XYL1 / P31867: NAD(P)H-dependent D-xylose reductase (EC 1.1.1.21; EC 1.1.1.307) from Scheffersomyces stipitis
P31867: D-xylose reductase (EC 1.1.1.307) from Scheffersomyces stipitis

31% id,
95% cov

A0A455KZK8: D-xylose reductase (EC 1.1.1.307) from Thermomyces lanuginosus

31% id,
94% cov

I7HD84: D-xylose reductase (EC 1.1.1.307) from Rhizomucor pusillus

30% id,
94% cov

More...

PfGW456L13_435: Oxidoreductase, aldo/keto reductase family
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

31% id,
93% cov

PfGW456L13_2966: Aldo-keto reductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

34% id,
84% cov

PfGW456L13_1631: Oxidoreductase, aldo/keto reductase family
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

32% id,
89% cov

S4WCW2: D-xylose reductase (EC 1.1.1.307) from Spathaspora passalidarum

26% id,
90% cov

XYL1_PICST / P31867: NAD(P)H-dependent D-xylose reductase; XR; EC 1.1.1.307 from Scheffersomyces stipitis
XYL1 / P31867: NAD(P)H-dependent D-xylose reductase (EC 1.1.1.21; EC 1.1.1.307) from Scheffersomyces stipitis
P31867: D-xylose reductase (EC 1.1.1.307) from Scheffersomyces stipitis

27% id,
81% cov

More...

PfGW456L13_2937: Oxidoreductase, aldo/keto reductase family
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

30% id,
91% cov

PfGW456L13_2994: Oxidoreductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

30% id,
90% cov

PfGW456L13_2474: Oxidoreductase, aldo/keto reductase family
is similar to:
PaperBLAST

XYL1_PICST / P31867: NAD(P)H-dependent D-xylose reductase; XR; EC 1.1.1.307 from Scheffersomyces stipitis
XYL1 / P31867: NAD(P)H-dependent D-xylose reductase (EC 1.1.1.21; EC 1.1.1.307) from Scheffersomyces stipitis
P31867: D-xylose reductase (EC 1.1.1.307) from Scheffersomyces stipitis

29% id,
94% cov

A0A0S2PJI4: D-xylose reductase (EC 1.1.1.307) from Spathaspora passalidarum

29% id,
92% cov

C5J3R6: D-xylose reductase (EC 1.1.1.307) from Rasamsonia emersonii

27% id,
92% cov

More...

PfGW456L13_193: OXIDOREDUCTASE, ALDO/KETO REDUCTASE FAMILY
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

38% id,
53% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2664743-2665630 (frame -1) on scaffold1/0|quiver|pilon
is similar to:
PaperBLAST

A0A455KZK8: D-xylose reductase (EC 1.1.1.307) from Thermomyces lanuginosus
Also see hits to annotated proteins above

33% id,
96% cov

Q7SD67: L-xylulose reductase (EC 1.1.1.10); D-xylose reductase (EC 1.1.1.307) from Neurospora crassa
Also see hits to annotated proteins above

33% id,
95% cov

G0SCE7: D-xylose reductase (EC 1.1.1.307) from Chaetomium thermophilum
Also see hits to annotated proteins above

33% id,
97% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory