Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)
Found 6 curated entries in PaperBLAST's database that match '1.1.99.2' as complete word(s).
These curated entries have 5 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query
| PfGW456L13_2575: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) is similar to: | PaperBLAST |
L2HDH_INDAL / S2DJ52: L-2-hydroxyglutarate dehydrogenase; EC 1.1.99.2 from Indibacter alkaliphilus | 24% id, 49% cov |
| PfGW456L13_1040: D-amino acid dehydrogenase small subunit (EC 1.4.99.1) is similar to: | PaperBLAST |
L2HDH_ACHAE / A0A0M7LBC1: L-2-hydroxyglutarate dehydrogenase; EC 1.1.99.2 from Achromobacter aegrifaciens | 33% id, 23% cov |
| PfGW456L13_3586: D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster is similar to: | PaperBLAST |
L2HDH_ACCRE / A0A011QK89: L-2-hydroxyglutarate dehydrogenase; EC 1.1.99.2 from Accumulibacter regalis | 35% id, 12% cov |
| PfGW456L13_2812: Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2) is similar to: | PaperBLAST |
L2HDH_INDAL / S2DJ52: L-2-hydroxyglutarate dehydrogenase; EC 1.1.99.2 from Indibacter alkaliphilus | 28% id, 13% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 910223-911662 (frame +2) on scaffold1/0|quiver|pilon is similar to: | PaperBLAST |
L2HDH_ACCRE / A0A011QK89: L-2-hydroxyglutarate dehydrogenase; EC 1.1.99.2 from Accumulibacter regalis | 28% id, 45% cov |
Lawrence Berkeley National Laboratory