Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)
Found 19 curated entries in PaperBLAST's database that match '1.1.99.6'.
These curated entries have 18 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query
| PfGW456L13_944: D-2-hydroxyglutarate dehydrogenase is similar to: | PaperBLAST |
DLD_ANAHA / D4MUV9: D-lactate dehydrogenase; EC 1.1.99.6 from Anaerostipes hadrus | 33% id, 98% cov |
DLD_ARCFU / O29853: D-lactate dehydrogenase; EC 1.1.99.6 from Archaeoglobus fulgidus | 30% id, 98% cov |
Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix | 29% id, 99% cov |
| PfGW456L13_5115: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE is similar to: | PaperBLAST |
Psest_3839: D-lactate/glycolate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6; EC 1.1.99.14) from Pseudomonas stutzeri | 26% id, 58% cov |
RR42_RS17315: D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Cupriavidus basilensis | 23% id, 65% cov |
PGA1_c29700: D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Phaeobacter inhibens | 24% id, 59% cov |
| PfGW456L13_5118: Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing is similar to: | PaperBLAST |
Psest_3841: D-lactate/glycolate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6; EC 1.1.99.14) from Pseudomonas stutzeri | 33% id, 42% cov |
RR42_RS17300: D-lactate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6) from Cupriavidus basilensis | 30% id, 43% cov |
DLD_ARCFU / O29853: D-lactate dehydrogenase; EC 1.1.99.6 from Archaeoglobus fulgidus | 27% id, 45% cov |
| PfGW456L13_5130: Alkyldihydroxyacetonephosphate synthase (EC 2.5.1.26) is similar to: | PaperBLAST |
Psest_3841: D-lactate/glycolate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6; EC 1.1.99.14) from Pseudomonas stutzeri | 31% id, 14% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 5706143-5706988 (frame +2) on scaffold1/0|quiver|pilon is similar to: | PaperBLAST |
Psest_3839: D-lactate/glycolate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6; EC 1.1.99.14) from Pseudomonas stutzeri | 26% id, 61% cov |
PGA1_c29700: D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Phaeobacter inhibens | 24% id, 63% cov |
| 5709005-5711917 (frame +2) on scaffold1/0|quiver|pilon is similar to: | PaperBLAST |
Psest_3841: D-lactate/glycolate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6; EC 1.1.99.14) from Pseudomonas stutzeri | 33% id, 45% cov |
Lawrence Berkeley National Laboratory