Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 21 curated entries in PaperBLAST's database that match '1.13.11.5' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_4962: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
is similar to:
PaperBLAST

PfGW456L13_4962: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Pseudomonas fluorescens

100% id,
100% cov

AO353_15550: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Pseudomonas fluorescens

93% id,
100% cov

Pf6N2E2_5290: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Pseudomonas fluorescens

90% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory