Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 8 curated entries in PaperBLAST's database that match '1.13.12.2' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_1171: Lysine 2-monooxygenase (EC 1.13.12.2)
is similar to:
PaperBLAST

PfGW456L13_1171: Lysine 2-monooxygenase (EC 1.13.12.2) from Pseudomonas fluorescens

100% id,
100% cov

Pf1N1B4_2505: Lysine 2-monooxygenase (EC 1.13.12.2) from Pseudomonas fluorescens

97% id,
100% cov

AO353_07420: Lysine 2-monooxygenase (EC 1.13.12.2) from Pseudomonas fluorescens

96% id,
100% cov

More...

PfGW456L13_1410: NAD(FAD)-utilizing dehydrogenases
is similar to:
PaperBLAST

PfGW456L13_1171: Lysine 2-monooxygenase (EC 1.13.12.2) from Pseudomonas fluorescens

30% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory