Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 22 curated entries in PaperBLAST's database that match '1.14.13.9' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_899: 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-)
is similar to:
PaperBLAST

Q8ISJ5: kynurenine 3-monooxygenase (EC 1.14.13.9) from Anopheles stephensi

27% id,
74% cov

KMO_AEDAE / Q86PM2: Kynurenine 3-monooxygenase; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Aedes aegypti
Q86PM2: kynurenine 3-monooxygenase (EC 1.14.13.9) from Aedes aegypti

25% id,
76% cov

KMO_HUMAN / O15229: Kynurenine 3-monooxygenase; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Homo sapiens
KMO / O15229: kynurenine 3-monooxygenase (EC 1.14.13.9) from Homo sapiens
O15229: kynurenine 3-monooxygenase (EC 1.14.13.9) from Homo sapiens

23% id,
72% cov

More...

PfGW456L13_2467: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
is similar to:
PaperBLAST

KMO_PSEFL / Q84HF5: Kynurenine 3-monooxygenase; PfKMO; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Pseudomonas fluorescens
Q84HF5: kynurenine 3-monooxygenase (EC 1.14.13.9) from Pseudomonas fluorescens

30% id,
23% cov

PfGW456L13_2155: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase
is similar to:
PaperBLAST

KMO_PSEFL / Q84HF5: Kynurenine 3-monooxygenase; PfKMO; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Pseudomonas fluorescens
Q84HF5: kynurenine 3-monooxygenase (EC 1.14.13.9) from Pseudomonas fluorescens

37% id,
17% cov

orf19.5443: kynurenine 3-monooxygenase; EC 1.14.13.9 from Candida albicans

33% id,
17% cov

PfGW456L13_1040: D-amino acid dehydrogenase small subunit (EC 1.4.99.1)
is similar to:
PaperBLAST

KMO_MOUSE / Q91WN4: Kynurenine 3-monooxygenase; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Mus musculus
Q91WN4: kynurenine 3-monooxygenase (EC 1.14.13.9) from Mus musculus

35% id,
16% cov

KMO_RAT / O88867: Kynurenine 3-monooxygenase; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Rattus norvegicus
O88867: kynurenine 3-monooxygenase (EC 1.14.13.9) from Rattus norvegicus

34% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory