Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)
Found 13 curated entries in PaperBLAST's database that match '1.3.1.12' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query
| PfGW456L13_215: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 53% id, 99% cov |
| PfGW456L13_2178: Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) / 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) is similar to: | PaperBLAST |
TYRC_ZYMMO / Q04983: Cyclohexadienyl dehydrogenase; Arogenate dehydrogenase; ADH; Prephenate dehydrogenase; PDH; EC 1.3.1.43; EC 1.3.1.12 from Zymomonas mobilis | 39% id, 95% cov |
J9XQS6: prephenate dehydrogenase (EC 1.3.1.12) from uncultured bacterium | 40% id, 92% cov |
O67636: prephenate dehydrogenase (EC 1.3.1.12) from Aquifex aeolicus | 40% id, 89% cov |
| PfGW456L13_4268: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 37% id, 64% cov |
| PfGW456L13_2176: Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) is similar to: | PaperBLAST |
O30012: prephenate dehydrogenase (EC 1.3.1.12); prephenate dehydratase (EC 4.2.1.51); chorismate mutase (EC 5.4.99.5) from Archaeoglobus fulgidus | 32% id, 57% cov |
| PfGW456L13_3542: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 33% id, 32% cov |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 28% id, 33% cov |
| PfGW456L13_863: Twin-arginine translocation protein TatB is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 31% id, 27% cov |
| PfGW456L13_899: 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) is similar to: | PaperBLAST |
novF / Q9L9G2: prephenate dehydrogenase (EC 1.3.1.12) from Streptomyces niveus | 36% id, 13% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2386006-2388261 (frame +1) on scaffold1/0|quiver|pilon is similar to: | PaperBLAST |
J9XQS6: prephenate dehydrogenase (EC 1.3.1.12) from uncultured bacterium | 39% id, 94% cov |
TYRA_MYCTU / O69721: Prephenate dehydrogenase; PDH; EC 1.3.1.12 from Mycobacterium tuberculosis | 33% id, 85% cov |
Lawrence Berkeley National Laboratory