Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 23 curated entries in PaperBLAST's database that match '1.3.8.4' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 25 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_2591: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4)
is similar to:		 PaperBLAST

AO353_20350: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

 98% id,
100% cov

Pf6N2E2_2191: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

 98% id,
100% cov

AO356_01580: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

 98% id,
100% cov

More...

PfGW456L13_1387: Acyl-CoA dehydrogenase (EC 1.3.8.7)
is similar to:		 PaperBLAST

AidB / b4187: putative acyl-CoA dehydrogenase AidB (EC 1.3.8.4) from Escherichia coli
AidB / P33224: isovaleryl-CoA dehydrogenase and DNA-binding transcriptional repressor (EC 1.3.8.4) from Escherichia coli

 45% id,
92% cov

Q75N94: isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Aspergillus oryzae

 25% id,
66% cov

IVD_ARATH / Q9SWG0: Isovaleryl-CoA dehydrogenase, mitochondrial; IVD; EC 1.3.8.4 from Arabidopsis thaliana
Q9SWG0: isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Arabidopsis thaliana

 25% id,
67% cov

More...

PfGW456L13_2983: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
is similar to:		 PaperBLAST

acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis

 42% id,
97% cov

PGA1_c10280: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Phaeobacter inhibens

 40% id,
96% cov

SM_b21121: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Sinorhizobium meliloti

 40% id,
96% cov

More...

PfGW456L13_2985: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
is similar to:		 PaperBLAST

acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis

 40% id,
99% cov

SM_b21121: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Sinorhizobium meliloti

 36% id,
97% cov

AO353_20350: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

 36% id,
98% cov

More...

PfGW456L13_1630: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
is similar to:		 PaperBLAST

SM_b21121: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Sinorhizobium meliloti

 39% id,
96% cov

Ac3H11_2991: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Acidovorax sp.

 39% id,
95% cov

Shewana3_1672: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Shewanella sp.

 37% id,
96% cov

More...

PfGW456L13_3387: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
is similar to:		 PaperBLAST

PGA1_c10280: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Phaeobacter inhibens

 38% id,
96% cov

Shewana3_1672: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Shewanella sp.

 38% id,
95% cov

Psest_1084: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas stutzeri

 37% id,
96% cov

More...

PfGW456L13_4073: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
is similar to:		 PaperBLAST

acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis

 36% id,
98% cov

AO353_20350: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

 36% id,
95% cov

Psest_1084: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas stutzeri

 36% id,
95% cov

More...

PfGW456L13_554: Glutaryl-CoA dehydrogenase (EC 1.3.99.7)
is similar to:		 PaperBLAST

Shewana3_1672: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Shewanella sp.

 37% id,
96% cov

acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis

 35% id,
99% cov

SM_b21121: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Sinorhizobium meliloti

 36% id,
97% cov

More...

PfGW456L13_3209: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
is similar to:		 PaperBLAST

liuA / Q9I296: isovaleryl-CoA dehydrogenase subunit (EC 1.3.8.4) from Pseudomonas aeruginosa

 36% id,
98% cov

Psest_1084: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas stutzeri

 35% id,
98% cov

PS417_17015: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas simiae

 35% id,
98% cov

More...

PfGW456L13_2286: Citronellyl-CoA dehydrogenase
is similar to:		 PaperBLAST

AO353_20350: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

 36% id,
94% cov

SM_b21121: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Sinorhizobium meliloti

 35% id,
95% cov

PS417_17015: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas simiae

 35% id,
94% cov

More...

PfGW456L13_2597: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4)
is similar to:		 PaperBLAST

acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis

 29% id,
99% cov

PGA1_c10280: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Phaeobacter inhibens

 27% id,
97% cov

IVD_HUMAN / P26440: Isovaleryl-CoA dehydrogenase, mitochondrial; IVD; Butyryl-CoA dehydrogenase; EC 1.3.8.4; EC 1.3.8.1 from Homo sapiens

 26% id,
88% cov

More...

PfGW456L13_2536: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
is similar to:		 PaperBLAST

Psest_1084: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas stutzeri

 29% id,
96% cov

PGA1_c10280: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Phaeobacter inhibens

 29% id,
96% cov

AO353_20350: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

 31% id,
88% cov

More...

PfGW456L13_3390: Acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor (EC 1.3.99.13)
is similar to:		 PaperBLAST

acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis

 28% id,
98% cov

Shewana3_1672: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Shewanella sp.

 28% id,
95% cov

SM_b21121: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Sinorhizobium meliloti

 28% id,
97% cov

More...

PfGW456L13_1156: Acyl-CoA dehydrogenase (EC 1.3.8.7)
is similar to:		 PaperBLAST

Psest_1084: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas stutzeri

 28% id,
96% cov

Ac3H11_2991: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Acidovorax sp.

 27% id,
98% cov

AO353_20350: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

 27% id,
96% cov

More...

PfGW456L13_2494: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
is similar to:		 PaperBLAST

SM_b21121: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Sinorhizobium meliloti

 27% id,
98% cov

PS417_17015: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas simiae

 27% id,
98% cov

IVD_SOLTU / Q9FS87: Isovaleryl-CoA dehydrogenase, mitochondrial; IVD; Isovaleryl-CoA dehydrogenase 2; St-IVD2; EC 1.3.8.4 from Solanum tuberosum
Q9FS87: isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Solanum tuberosum

 28% id,
92% cov

More...

PfGW456L13_4891: Acyl-CoA dehydrogenase (EC 1.3.8.7)
is similar to:		 PaperBLAST

Ac3H11_2991: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Acidovorax sp.

 27% id,
98% cov

Psest_1084: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas stutzeri

 27% id,
96% cov

Sama_1362: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Shewanella amazonensis

 25% id,
99% cov

More...

PfGW456L13_3460: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
is similar to:		 PaperBLAST

acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis

 26% id,
99% cov

PGA1_c10280: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Phaeobacter inhibens

 24% id,
97% cov

B5UB85: isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Bombyx mori

 25% id,
92% cov

More...

PfGW456L13_3166: Acyl-CoA dehydrogenase (EC 1.3.8.7)
is similar to:		 PaperBLAST

Ac3H11_2991: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Acidovorax sp.

 26% id,
96% cov

B5UB85: isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Bombyx mori

 23% id,
97% cov

acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis

 28% id,
69% cov

More...

PfGW456L13_2495: Acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor (EC 1.3.99.13)
is similar to:		 PaperBLAST

Psest_1084: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas stutzeri

 25% id,
97% cov

Pf6N2E2_2191: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

 24% id,
97% cov

AO356_01580: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

 24% id,
97% cov

More...

PfGW456L13_224: Acyl-CoA dehydrogenase (EC 1.3.8.7)
is similar to:		 PaperBLAST

Psest_1084: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas stutzeri

 28% id,
86% cov

liuA / Q9I296: isovaleryl-CoA dehydrogenase subunit (EC 1.3.8.4) from Pseudomonas aeruginosa

 28% id,
86% cov

AO353_20350: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

 26% id,
86% cov

More...

PfGW456L13_1155: Acyl-CoA dehydrogenase (EC 1.3.8.7)
is similar to:		 PaperBLAST

IVD_HUMAN / P26440: Isovaleryl-CoA dehydrogenase, mitochondrial; IVD; Butyryl-CoA dehydrogenase; EC 1.3.8.4; EC 1.3.8.1 from Homo sapiens

 26% id,
89% cov

IVD_RAT / P12007: Isovaleryl-CoA dehydrogenase, mitochondrial; IVD; Butyryl-CoA dehydrogenase; EC 1.3.8.4; EC 1.3.8.1 from Rattus norvegicus
P12007: isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Rattus norvegicus

 25% id,
90% cov

Ac3H11_2991: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Acidovorax sp.

 24% id,
85% cov

More...

PfGW456L13_450: Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme
is similar to:		 PaperBLAST

AO356_01580: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

 26% id,
90% cov

Pf6N2E2_2191: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

 26% id,
90% cov

AO353_20350: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

 26% id,
90% cov

More...

PfGW456L13_1153: Acyl-CoA dehydrogenase (EC 1.3.8.7)
is similar to:		 PaperBLAST

Ac3H11_2991: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Acidovorax sp.

 23% id,
98% cov

acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis

 36% id,
16% cov

PfGW456L13_3389: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
is similar to:		 PaperBLAST

Ac3H11_2991: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Acidovorax sp.

 25% id,
87% cov

Shewana3_1672: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Shewanella sp.

 25% id,
87% cov

Sama_1362: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Shewanella amazonensis

 24% id,
87% cov

More...

PfGW456L13_2537: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1)
is similar to:		 PaperBLAST

B5UB85: isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Bombyx mori

 25% id,
40% cov

SM_b21121: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Sinorhizobium meliloti

 32% id,
30% cov

PGA1_c10280: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Phaeobacter inhibens

 29% id,
31% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 25 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory