Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 43 curated entries in PaperBLAST's database that match '1.4.3.21' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_2439: Monoamine oxidase (1.4.3.4)
is similar to:
PaperBLAST

AMO_KLEM8 / P80695: Primary amine oxidase; Monamine oxidase; Tyramine oxidase; EC 1.4.3.21 from Klebsiella michiganensis

72% id,
99% cov

AMO_ECOLI / P46883: Primary amine oxidase; 2-phenylethylamine oxidase; Copper amine oxidase; Tyramine oxidase; EC 1.4.3.21 from Escherichia coli
MaoA / b1386: copper-containing amine oxidase (EC 1.4.3.21) from Escherichia coli
tynA / P46883: copper-containing amine oxidase (EC 1.4.3.21) from Escherichia coli

71% id,
99% cov

CAOA2_ARATH / F4IAX0: Amine oxidase [copper-containing] alpha 2, peroxisomal; AtCuAO8; AtCuAOalpha2; EC 1.4.3.21 from Arabidopsis thaliana
F4IAX0: primary-amine oxidase (EC 1.4.3.21) from Arabidopsis thaliana

33% id,
95% cov

More...

PfGW456L13_1045: Amine oxidase [flavin-containing] (EC 1.4.3.4)
is similar to:
PaperBLAST

AOFB_HUMAN / P27338: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens
MAOB / P27338: monoamine oxidase B subunit (EC 1.4.3.21; EC 1.4.3.4) from Homo sapiens

26% id,
87% cov

AOF_DANRE / Q6NSN2: Amine oxidase [flavin-containing]; Monoamine oxidase; MAO; Z-MAO; EC 1.4.3.21; EC 1.4.3.4 from Danio rerio

26% id,
88% cov

AOFB_BOVIN / P56560: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Bos taurus

26% id,
87% cov

More...

PfGW456L13_2519: 3-oxosteroid 1-dehydrogenase (EC 1.3.99.4)
is similar to:
PaperBLAST

AOFB_RAT / P19643: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Rattus norvegicus

27% id,
31% cov

AOFB_HUMAN / P27338: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens
MAOB / P27338: monoamine oxidase B subunit (EC 1.4.3.21; EC 1.4.3.4) from Homo sapiens

38% id,
12% cov

PfGW456L13_809: Gamma-glutamyl-putrescine oxidase (EC1.4.3.-)
is similar to:
PaperBLAST

AOFB_HUMAN / P27338: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens
MAOB / P27338: monoamine oxidase B subunit (EC 1.4.3.21; EC 1.4.3.4) from Homo sapiens

30% id,
24% cov

AOF_DANRE / Q6NSN2: Amine oxidase [flavin-containing]; Monoamine oxidase; MAO; Z-MAO; EC 1.4.3.21; EC 1.4.3.4 from Danio rerio

30% id,
23% cov

AOFA_HUMAN / P21397: Amine oxidase [flavin-containing] A; Monoamine oxidase type A; MAO-A; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens

26% id,
26% cov

More...

PfGW456L13_3923: Nucleoside-diphosphate-sugar epimerases
is similar to:
PaperBLAST

AOFA_HUMAN / P21397: Amine oxidase [flavin-containing] A; Monoamine oxidase type A; MAO-A; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens

41% id,
16% cov

AOF_DANRE / Q6NSN2: Amine oxidase [flavin-containing]; Monoamine oxidase; MAO; Z-MAO; EC 1.4.3.21; EC 1.4.3.4 from Danio rerio

41% id,
12% cov

PfGW456L13_126: L-pipecolate oxidase (1.5.3.7)
is similar to:
PaperBLAST

AOFA_HUMAN / P21397: Amine oxidase [flavin-containing] A; Monoamine oxidase type A; MAO-A; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens

33% id,
18% cov

PfGW456L13_5129: Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)
is similar to:
PaperBLAST

AOFA_HUMAN / P21397: Amine oxidase [flavin-containing] A; Monoamine oxidase type A; MAO-A; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens

29% id,
20% cov

PfGW456L13_3425: Beta-carotene ketolase (EC 1.14.-.-)
is similar to:
PaperBLAST

AOFA_HUMAN / P21397: Amine oxidase [flavin-containing] A; Monoamine oxidase type A; MAO-A; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens

60% id,
8% cov

AOFA_MOUSE / Q64133: Amine oxidase [flavin-containing] A; Monoamine oxidase type A; MAO-A; EC 1.4.3.21; EC 1.4.3.4 from Mus musculus

57% id,
7% cov

AOF_DANRE / Q6NSN2: Amine oxidase [flavin-containing]; Monoamine oxidase; MAO; Z-MAO; EC 1.4.3.21; EC 1.4.3.4 from Danio rerio

54% id,
7% cov

PfGW456L13_1040: D-amino acid dehydrogenase small subunit (EC 1.4.99.1)
is similar to:
PaperBLAST

AOFA_HUMAN / P21397: Amine oxidase [flavin-containing] A; Monoamine oxidase type A; MAO-A; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens

39% id,
11% cov

AOFB_MOUSE / Q8BW75: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Mus musculus

37% id,
11% cov

AOFB_RAT / P19643: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Rattus norvegicus

37% id,
11% cov

More...

PfGW456L13_1119: Sarcosine oxidase alpha subunit (EC 1.5.3.1)
is similar to:
PaperBLAST

AOFB_HUMAN / P27338: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens
MAOB / P27338: monoamine oxidase B subunit (EC 1.4.3.21; EC 1.4.3.4) from Homo sapiens

39% id,
8% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory