Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 119 curated entries in PaperBLAST's database that match '1.5.1.2'.

These curated entries have 99 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_1050: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) is similar to:	PaperBLAST
Q87V72: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Pseudomonas syringae	89% id, 100% cov
Q7NZF6: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Chromobacterium violaceum	63% id, 100% cov
Q6J6A1: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Collimonas fungivorans	63% id, 100% cov
Q8Y389: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Ralstonia solanacearum	62% id, 100% cov
A0A0H3LLF9: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Bordetella bronchiseptica	61% id, 97% cov
Q9PEA7: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Xylella fastidiosa	59% id, 98% cov
Q83A63: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Coxiella burnetii	52% id, 93% cov
O67422: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Aquifex aeolicus	45% id, 93% cov
Q7CXU3: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Agrobacterium tumefaciens	41% id, 94% cov
Q5SLG6: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Thermus thermophilus Q72H39: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Thermus thermophilus	41% id, 93% cov
metF: 5,10-methylenetetrahydrofolate reductase; EC 1.5.1.20 from Leptospira interrogans Q9L5C1: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Leptospira interrogans	40% id, 94% cov
Q7UNJ7: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Rhodopirellula baltica	39% id, 95% cov
Q6N3J2: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Rhodopseudomonas palustris	40% id, 91% cov
Q72DD2: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Desulfovibrio vulgaris	39% id, 93% cov
Q98K87: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Mesorhizobium loti	40% id, 89% cov
A0A0H3G3R1: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Brucella suis	39% id, 91% cov
Q87L52: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Vibrio parahaemolyticus	38% id, 92% cov
Q7MYD0: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Photorhabdus luminescens	39% id, 91% cov
Q89UJ7: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Bradyrhizobium japonicum	40% id, 88% cov
MetF / b3941: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) from Escherichia coli Q0SY49: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Shigella flexneri	39% id, 90% cov
Q9A6F4: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Caulobacter vibrioides	39% id, 87% cov
Q9CP31: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Pasteurella multocida	38% id, 91% cov
Q9KNP6: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Vibrio cholerae	39% id, 87% cov
Q7VRL4: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Candidatus Blochmannia	37% id, 90% cov
Q92NK1: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Sinorhizobium meliloti	38% id, 87% cov
Q7MH66: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Vibrio vulnificus	39% id, 82% cov
Q6NGB6: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Corynebacterium diphtheriae	35% id, 87% cov
Q8NNM2: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Corynebacterium glutamicum	33% id, 87% cov
Q8DQT1: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Streptococcus pneumoniae	29% id, 99% cov
Q8A146: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Bacteroides thetaiotaomicron	27% id, 94% cov
Q10BJ7: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Oryza sativa	38% id, 48% cov
Q9SE94: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20); methylenetetrahydrofolate reductase (NADH) (EC 1.5.1.54) from Zea mays	37% id, 48% cov
O80585: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20); methylenetetrahydrofolate reductase (NADH) (EC 1.5.1.54) from Arabidopsis thaliana	37% id, 48% cov
met11 / RF\|NP_593430.1: methylenetetrahydrofolate reductase Met11; EC 1.5.1.20 from Schizosaccharomyces pombe	39% id, 44% cov
Q54X84: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Dictyostelium discoideum	38% id, 44% cov
Q2UEQ8: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Aspergillus oryzae	37% id, 45% cov
Q6FU20: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from [Candida] glabrata	35% id, 47% cov
metF: methylenetetrahydrofolate reductase; EC 1.5.1.20 from Emericella nidulans Q5B0P7: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Aspergillus nidulans	36% id, 44% cov
P53128: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20); methylenetetrahydrofolate reductase (NADPH) (EC 1.5.1.53) from Saccharomyces cerevisiae	33% id, 48% cov
MTHR1_SCHPO / Q10258: Methylenetetrahydrofolate reductase 1; EC 1.5.1.20 from Schizosaccharomyces pombe met9 / GI\|1204232: methylenetetrahydrofolate reductase Met9; EC 1.5.1.20 from Schizosaccharomyces pombe Q10258: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Schizosaccharomyces pombe	34% id, 46% cov
P42898: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20); methylenetetrahydrofolate reductase (NADPH) (EC 1.5.1.53) from Homo sapiens	36% id, 43% cov
Q60HE5: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Macaca fascicularis	36% id, 43% cov
Q9WU20: methylenetetrahydrofolate dehydrogenase (NAD+) (EC 1.5.1.15); methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Mus musculus	35% id, 43% cov
Q5AEI0: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Candida albicans	34% id, 45% cov
Q5I598: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Bos taurus	35% id, 43% cov
Q7ZWU2: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Xenopus laevis	34% id, 44% cov
metA: methylenetetrahydrofolate reductase; EC 1.5.1.20 from Emericella nidulans	34% id, 43% cov
Q17693: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Caenorhabditis elegans	34% id, 43% cov
Q4T956: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Tetraodon nigroviridis	36% id, 33% cov
More...

PfGW456L13_2974: Delta 1-piperideine-2-carboxylate reductase (EC 1.5.1.21) / Delta 1-pyrroline-2-carboxylate reductase (EC 1.5.1.1) is similar to:	PaperBLAST
PY2CR_PSEUB / Q4U331: Delta(1)-pyrroline-2-carboxylate/Delta(1)-piperideine-2-carboxylate reductase; Pyr2C/Pip2C reductase; N-methyl-L-amino acid dehydrogenase; EC 1.5.1.21; EC 1.4.1.17 from Pseudomonas syringae Q4U331: 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] (EC 1.5.1.1); 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase (NADPH) (EC 1.5.1.21) from Pseudomonas syringae	75% id, 100% cov
PY2CR_PSEPU / Q5FB93: Delta(1)-pyrroline-2-carboxylate/Delta(1)-piperideine-2-carboxylate reductase; Pyr2C/Pip2C reductase; N-methyl-L-amino acid dehydrogenase; NMAADH; EC 1.5.1.21; EC 1.4.1.17 from Pseudomonas putida	75% id, 100% cov
PY2CR_PSEAE / Q9I492: Delta(1)-pyrroline-2-carboxylate/Delta(1)-piperideine-2-carboxylate reductase; Pyr2C/Pip2C reductase; Delta(1)-pyrroline-(4S)-hydroxy-2-carboxylate reductase; Pyr4SH2C reductase; Proline ketimine reductase; EC 1.5.1.21; EC 1.5.1.- from Pseudomonas aeruginosa Q9I492: 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase (NADPH) (EC 1.5.1.21) from Pseudomonas aeruginosa	43% id, 99% cov

PfGW456L13_1010: Pyrroline-5-carboxylate reductase (EC 1.5.1.2) is similar to:	PaperBLAST
P5CR_PSEAE / P22008: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Pseudomonas aeruginosa	74% id, 100% cov
Shew_1136: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Shewanella loihica	40% id, 100% cov
PROC1 / F2E7Q2: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Hordeum vulgare	41% id, 96% cov
P5CR_METAC / Q9HH99: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Methanosarcina acetivorans	38% id, 100% cov
CCNA_00528: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Caulobacter crescentus	38% id, 99% cov
DVU2332: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Desulfovibrio vulgaris	37% id, 99% cov
O87725: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Acetoanaerobium sticklandii	37% id, 100% cov
P5CR_ECOLI / P0A9L8: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Escherichia coli ProC / b0386: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Escherichia coli proC / P0A9L8: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Escherichia coli	36% id, 100% cov
G7KRM5: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Medicago truncatula	37% id, 96% cov
P5CR2_BACSU / P54552: Pyrroline-5-carboxylate reductase 2; P5C reductase 2; P5CR 2; PCA reductase 2; EC 1.5.1.2 from Bacillus subtilis	37% id, 96% cov
F4K884: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Arabidopsis thaliana	38% id, 91% cov
BT3757: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Bacteroides thetaiotaomicron	34% id, 99% cov
Q4DH60: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Trypanosoma cruzi	34% id, 100% cov
P5CR1_MOUSE / Q922W5: Pyrroline-5-carboxylate reductase 1, mitochondrial; P5C reductase 1; P5CR 1; EC 1.5.1.2 from Mus musculus	38% id, 88% cov
P5CR2_HUMAN / Q96C36: Pyrroline-5-carboxylate reductase 2; P5C reductase 2; P5CR 2; EC 1.5.1.2 from Homo sapiens Q96C36: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Homo sapiens	39% id, 85% cov
P5CR1_HUMAN / P32322: Pyrroline-5-carboxylate reductase 1, mitochondrial; P5C reductase 1; P5CR 1; EC 1.5.1.2 from Homo sapiens PYCR1 / P32322: pyrroline-5-carboxylate reductase 1 subunit (EC 1.5.1.2) from Homo sapiens P32322: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Homo sapiens	38% id, 85% cov
CA265_RS18505: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Pedobacter sp.	31% id, 99% cov
P5CR3_HUMAN / Q53H96: Pyrroline-5-carboxylate reductase 3; P5C reductase 3; P5CR 3; Pyrroline-5-carboxylate reductase-like protein; EC 1.5.1.2 from Homo sapiens	31% id, 98% cov
P5CR1_BACSU / P0CI77: Pyrroline-5-carboxylate reductase 1; P5C reductase 1; P5CR 1; PCA reductase 1; EC 1.5.1.2 from Bacillus subtilis	33% id, 92% cov
P5CR_KLULA / Q6CR99: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; EC 1.5.1.2 from Kluyveromyces lactis	30% id, 100% cov
P5CR_TREPA / P27771: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Treponema pallidum	30% id, 100% cov
P5CR_YEAST / P32263: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; EC 1.5.1.2 from Saccharomyces cerevisiae PRO3 / P32263: pyrroline-5-carboxylate reductase subunit (EC 1.5.1.2) from Saccharomyces cerevisiae	28% id, 98% cov
Q97ZT3: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Saccharolobus solfataricus	27% id, 96% cov
beta-AlDH / A9CQJ3: β-alanopine dehydrogenase (EC 1.5.1.26) from Cellana grata	27% id, 29% cov
More...

PfGW456L13_918: FMN reductase (EC 1.5.1.29) is similar to:	PaperBLAST
msuE / GB\|AAG05745.1: NADH-dependent FMN reductase MsuE; EC 1.5.1.29 from Pseudomonas aeruginosa	39% id, 52% cov

PfGW456L13_1695: Ornithine cyclodeaminase (EC 4.3.1.12) is similar to:	PaperBLAST
B1GT63: Strombine dehydrogenase (EC 1.5.1.22) from Suberites domuncula	29% id, 62% cov

PfGW456L13_2847: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) is similar to:	PaperBLAST
YITJ_BACSU / O06745: Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase; EC 2.1.1.10; EC 1.5.1.20 from Bacillus subtilis	30% id, 47% cov

PfGW456L13_2401: Methylglyoxal reductase, acetol producing (EC 1.1.1.-) / 2,5-diketo-D-gluconic acid reductase B (EC 1.1.1.274) is similar to:	PaperBLAST
STORR_PAPSO / P0DKI7: Bifunctional protein STORR; (S)- to (R)-reticuline; EC 1.14.19.54; EC 1.5.1.27 from Papaver somniferum P0DKI7: 1,2-dehydroreticuline synthase (EC 1.14.19.54); 1,2-dehydroreticulinium reductase (NADPH) (EC 1.5.1.27) from Papaver somniferum	28% id, 32% cov

PfGW456L13_1417: oxidoreductase, aldo/keto reductase family is similar to:	PaperBLAST
STORR_PAPSO / P0DKI7: Bifunctional protein STORR; (S)- to (R)-reticuline; EC 1.14.19.54; EC 1.5.1.27 from Papaver somniferum P0DKI7: 1,2-dehydroreticuline synthase (EC 1.14.19.54); 1,2-dehydroreticulinium reductase (NADPH) (EC 1.5.1.27) from Papaver somniferum	27% id, 32% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1029434-1030024 (frame +2) on scaffold1/0\|quiver\|pilon is similar to:	PaperBLAST
msuE / GB\|AAG05745.1: NADH-dependent FMN reductase MsuE; EC 1.5.1.29 from Pseudomonas aeruginosa Also see hits to annotated proteins above	34% id, 78% cov

1565138-1566031 (frame -1) on scaffold1/0\|quiver\|pilon is similar to:	PaperBLAST
STORR_PAPSO / P0DKI7: Bifunctional protein STORR; (S)- to (R)-reticuline; EC 1.14.19.54; EC 1.5.1.27 from Papaver somniferum P0DKI7: 1,2-dehydroreticuline synthase (EC 1.14.19.54); 1,2-dehydroreticulinium reductase (NADPH) (EC 1.5.1.27) from Papaver somniferum Also see hits to annotated proteins above	27% id, 34% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory