Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)
Found 22 curated entries in PaperBLAST's database that match '2.3.3.14' as complete word(s).
These curated entries have 14 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query
| PfGW456L13_4854: 2-isopropylmalate synthase (EC 2.3.3.13) is similar to: | PaperBLAST |
D0VY45: homocitrate synthase (EC 2.3.3.14) from Lotus japonicus | 27% id, 94% cov |
AKSA_METJA / Q57926: Homocitrate synthase AksA; (R)-homo(2)citrate synthase; (R)-homo(3)citrate synthase; EC 2.3.3.14; EC 2.3.3.- from Methanocaldococcus jannaschii | 27% id, 85% cov |
P58637: homocitrate synthase (EC 2.3.3.14) from Nostoc sp. | 26% id, 50% cov |
| PfGW456L13_2506: 4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.39) is similar to: | PaperBLAST |
A0A0S6UXF5: homocitrate synthase (EC 2.3.3.14) from Bradyrhizobium sp. | 28% id, 87% cov |
A0A1Y6KBA1: homocitrate synthase (EC 2.3.3.14) from Bradyrhizobium sp. | 28% id, 82% cov |
NIFV_AZOVI / P05342: Homocitrate synthase; EC 2.3.3.14 from Azotobacter vinelandii | 24% id, 87% cov |
| PfGW456L13_4547: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) is similar to: | PaperBLAST |
AKSA_METJA / Q57926: Homocitrate synthase AksA; (R)-homo(2)citrate synthase; (R)-homo(3)citrate synthase; EC 2.3.3.14; EC 2.3.3.- from Methanocaldococcus jannaschii | 22% id, 67% cov |
HOSA_SULTO / Q971S5: Homocitrate synthase; HCS; EC 2.3.3.14 from Sulfurisphaera tokodaii | 23% id, 61% cov |
HOSC_YEAST / P48570: Homocitrate synthase, cytosolic isozyme; HCS; EC 2.3.3.14 from Saccharomyces cerevisiae | 27% id, 52% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2770694-2771815 (frame +2) on scaffold1/0|quiver|pilon is similar to: | PaperBLAST |
A0A0S6UXF5: homocitrate synthase (EC 2.3.3.14) from Bradyrhizobium sp. | 28% id, 91% cov |
| 1303602-1304099 (frame -3) on scaffold1/0|quiver|pilon is similar to: | PaperBLAST |
HOSA_SULTO / Q971S5: Homocitrate synthase; HCS; EC 2.3.3.14 from Sulfurisphaera tokodaii | 28% id, 21% cov |
Lawrence Berkeley National Laboratory