Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 80 curated entries in PaperBLAST's database that match '2.5.1.47' as complete word(s).

These curated entries have 59 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_4472: Cysteine synthase (EC 2.5.1.47)
is similar to:
PaperBLAST

CYSK_ECOLI / P0ABK5: Cysteine synthase A; CSase A; O-acetylserine (thiol)-lyase A; OAS-TL A; O-acetylserine sulfhydrylase A; S-carboxymethylcysteine synthase; Sulfate starvation-induced protein 5; SSI5; EC 2.5.1.47; EC 4.5.1.5 from Escherichia coli
Ssi5 / b2414: cysteine synthase A (EC 2.5.1.47; EC 4.4.1.1; EC 4.4.1.28) from Escherichia coli
cysK / P0ABK5: cysteine synthase A (EC 2.5.1.47; EC 4.4.1.1) from Escherichia coli
P0ABK5: cysteine synthase (EC 2.5.1.47) from Escherichia coli

71% id,
100% cov

CYSK_SALTY / P0A1E3: Cysteine synthase A; CSase A; O-acetylserine (thiol)-lyase A; OAS-TL A; O-acetylserine sulfhydrylase A; EC 2.5.1.47 from Salmonella typhimurium
P0A1E3: cysteine synthase (EC 2.5.1.47) from Salmonella enterica

70% id,
100% cov

P45040: cysteine synthase (EC 2.5.1.47) from Haemophilus influenzae

68% id,
99% cov

More...

PfGW456L13_2032: Cysteine synthase B (EC 2.5.1.47)
is similar to:
PaperBLAST

CYSM_ECOLI / P16703: Cysteine synthase B; CSase B; O-acetylserine (thiol)-lyase B; OAS-TL B; O-acetylserine sulfhydrylase B; EC 2.5.1.47 from Escherichia coli
CysM / b2421: cysteine synthase B (EC 2.5.1.47; EC 2.5.1.144; EC 4.4.1.1; EC 4.4.1.28) from Escherichia coli
cysM / P16703: cysteine synthase B (EC 2.5.1.47; EC 2.5.1.144; EC 4.4.1.1) from Escherichia coli

70% id,
96% cov

P29848: S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) (EC 2.5.1.144); cysteine synthase (EC 2.5.1.47) from Salmonella enterica

69% id,
96% cov

CS1 / A2EI82: O-phosphoserine sulfhydrylase monomer (EC 2.5.1.47; EC 2.5.1.65) from Trichomonas vaginalis

46% id,
99% cov

More...

PfGW456L13_4616: Cysteine synthase (EC 2.5.1.47)
is similar to:
PaperBLAST

DCSD_STRLA / D2Z027: O-ureido-L-serine synthase; Cysteine synthase homolog DscD; O-acetylserine sulfhydrylase; EC 2.6.99.3; EC 2.5.1.47 from Streptomyces lavendulae
dcsD / D2Z027: O-ureido-L-serine synthase (EC 2.5.1.47; EC 2.6.99.3) from Streptomyces lavendulae
D2Z027: cysteine synthase (EC 2.5.1.47); O-ureido-L-serine synthase (EC 2.6.99.3) from Streptomyces lavendulae

29% id,
90% cov

A0A0F6AQU1: cysteine synthase (EC 2.5.1.47) from Brucella abortus

28% id,
87% cov

CYSK_SALTY / P0A1E3: Cysteine synthase A; CSase A; O-acetylserine (thiol)-lyase A; OAS-TL A; O-acetylserine sulfhydrylase A; EC 2.5.1.47 from Salmonella typhimurium
P0A1E3: cysteine synthase (EC 2.5.1.47) from Salmonella enterica

28% id,
86% cov

More...

PfGW456L13_3031: Threonine dehydratase biosynthetic (EC 4.3.1.19)
is similar to:
PaperBLAST

cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori

26% id,
95% cov

A0A2H5HU77: cysteine synthase (EC 2.5.1.47) from Lathyrus sativus

26% id,
96% cov

Q9XEA8: cysteine synthase (EC 2.5.1.47) from Oryza sativa

25% id,
96% cov

More...

PfGW456L13_949: Threonine dehydratase biosynthetic (EC 4.3.1.19)
is similar to:
PaperBLAST

A0A2H5HU77: cysteine synthase (EC 2.5.1.47) from Lathyrus sativus

25% id,
96% cov

O15635: cysteine synthase (EC 2.5.1.47) from Entamoeba histolytica

26% id,
91% cov

O15570: cysteine synthase (EC 2.5.1.47) from Entamoeba histolytica

26% id,
91% cov

More...

PfGW456L13_566: Tryptophan synthase beta chain (EC 4.2.1.20)
is similar to:
PaperBLAST

Q84IF9: cysteine synthase (EC 2.5.1.47); L-3-cyanoalanine synthase (EC 4.4.1.9) from Geobacillus stearothermophilus

26% id,
91% cov

PfGW456L13_3185: Threonine dehydratase (EC 4.3.1.19)
is similar to:
PaperBLAST

CS1 / A2EI82: O-phosphoserine sulfhydrylase monomer (EC 2.5.1.47; EC 2.5.1.65) from Trichomonas vaginalis

25% id,
86% cov

E5LPF4: cysteine synthase (EC 2.5.1.47) from Lacticaseibacillus casei

24% id,
87% cov

CYSK_CITLA / Q43317: Cysteine synthase; CSase; Beta-PA/CSase; Beta-pyrazolylalanine synthase; L-mimosine synthase; O-acetylserine (thiol)-lyase; OAS-TL; O-acetylserine sulfhydrylase; EC 2.5.1.47; EC 2.5.1.51; EC 4.2.1.50; EC 2.5.1.52 from Citrullus lanatus

25% id,
83% cov

More...

PfGW456L13_3934: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
is similar to:
PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

39% id,
50% cov

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

40% id,
38% cov

METW_YEAST / Q12198: Homocysteine/cysteine synthase; Hydrogen sulfide utilizing 1; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

34% id,
17% cov

PfGW456L13_3648: D-serine dehydratase (EC 4.3.1.18)
is similar to:
PaperBLAST

A0A0F6AQU1: cysteine synthase (EC 2.5.1.47) from Brucella abortus

24% id,
71% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory