Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 44 curated entries in PaperBLAST's database that match '2.6.1.19'.

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 14 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_494: 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
is similar to:
PaperBLAST

gabT / Q4KKA1: 4-aminobutyrate transaminase subunit (EC 2.6.1.19) from Pseudomonas fluorescens

97% id,
100% cov

GABT_ECOLI / P22256: 4-aminobutyrate aminotransferase GabT; 5-aminovalerate transaminase; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; Glutamate:succinic semialdehyde transaminase; L-AIBAT; EC 2.6.1.19; EC 2.6.1.48 from Escherichia coli
GabT / b2662: 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.48; EC 2.6.1.11) from Escherichia coli
gabT / P22256: 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.48; EC 2.6.1.11) from Escherichia coli

74% id,
99% cov

Sama_2636: gamma-aminobutyrate transaminase (EC 2.6.1.19) from Shewanella amazonensis

71% id,
99% cov

More...

PfGW456L13_927: Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18)
is similar to:
PaperBLAST

AO353_08585: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) from Pseudomonas fluorescens

94% id,
100% cov

AO356_13150: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) from Pseudomonas fluorescens

94% id,
100% cov

Pf6N2E2_4512: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) from Pseudomonas fluorescens

93% id,
100% cov

More...

PfGW456L13_1398: Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18)
is similar to:
PaperBLAST

BPHYT_RS23155: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) from Burkholderia phytofirmans

60% id,
94% cov

Sama_2643: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) from Shewanella amazonensis

53% id,
96% cov

PS417_27130: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) from Pseudomonas simiae

52% id,
97% cov

More...

PfGW456L13_1971: Succinylornithine transaminase (EC 2.6.1.81)
is similar to:
PaperBLAST

slr1022 / P73133: bifunctional acetylornithine transaminase/4-aminobutyrate—2-oxoglutarate transaminase (EC 2.6.1.19; EC 2.6.1.11) from Synechocystis sp.
P73133: acetylornithine transaminase (EC 2.6.1.11); 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) from Synechococcus sp.

45% id,
95% cov

B1XNF8: acetylornithine transaminase (EC 2.6.1.11); 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) from Synechococcus sp.

41% id,
98% cov

gabT / Q4KKA1: 4-aminobutyrate transaminase subunit (EC 2.6.1.19) from Pseudomonas fluorescens

36% id,
98% cov

More...

PfGW456L13_4982: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
is similar to:
PaperBLAST

gabT / Q0K2K2: 4-aminobutyrate aminotransferase monomer (EC 2.6.1.19) from Cupriavidus necator
Q0K2K2: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) from Cupriavidus necator

43% id,
97% cov

gabT / Q4KKA1: 4-aminobutyrate transaminase subunit (EC 2.6.1.19) from Pseudomonas fluorescens

43% id,
97% cov

GABT_ECOLI / P22256: 4-aminobutyrate aminotransferase GabT; 5-aminovalerate transaminase; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; Glutamate:succinic semialdehyde transaminase; L-AIBAT; EC 2.6.1.19; EC 2.6.1.48 from Escherichia coli
GabT / b2662: 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.48; EC 2.6.1.11) from Escherichia coli
gabT / P22256: 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.48; EC 2.6.1.11) from Escherichia coli

43% id,
97% cov

More...

PfGW456L13_2414: Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18)
is similar to:
PaperBLAST

Sama_2643: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) from Shewanella amazonensis

41% id,
98% cov

AO353_08585: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) from Pseudomonas fluorescens

40% id,
94% cov

PS417_27130: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) from Pseudomonas simiae

38% id,
96% cov

More...

PfGW456L13_1158: Acetylornithine aminotransferase (EC 2.6.1.11)
is similar to:
PaperBLAST

B1XNF8: acetylornithine transaminase (EC 2.6.1.11); 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) from Synechococcus sp.

38% id,
97% cov

slr1022 / P73133: bifunctional acetylornithine transaminase/4-aminobutyrate—2-oxoglutarate transaminase (EC 2.6.1.19; EC 2.6.1.11) from Synechocystis sp.
P73133: acetylornithine transaminase (EC 2.6.1.11); 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) from Synechococcus sp.

39% id,
92% cov

gabT / Q0K2K2: 4-aminobutyrate aminotransferase monomer (EC 2.6.1.19) from Cupriavidus necator
Q0K2K2: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) from Cupriavidus necator

31% id,
93% cov

More...

PfGW456L13_2301: Pyoverdin biosynthesis protein PvdH, L-2,4-diaminobutyrate:2-oxoglutarate aminotransferase (EC 2.6.1.76)
is similar to:
PaperBLAST

gabT / Q0K2K2: 4-aminobutyrate aminotransferase monomer (EC 2.6.1.19) from Cupriavidus necator
Q0K2K2: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) from Cupriavidus necator

39% id,
93% cov

D3EKC0: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); diaminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.76) from Paenibacillus lautus

38% id,
96% cov

A0A5B8KQ12: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) from Agrobacterium tumefaciens

36% id,
95% cov

More...

PfGW456L13_4910: Acetylornithine aminotransferase (EC 2.6.1.11)
is similar to:
PaperBLAST

B1XNF8: acetylornithine transaminase (EC 2.6.1.11); 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) from Synechococcus sp.

40% id,
92% cov

slr1022 / P73133: bifunctional acetylornithine transaminase/4-aminobutyrate—2-oxoglutarate transaminase (EC 2.6.1.19; EC 2.6.1.11) from Synechocystis sp.
P73133: acetylornithine transaminase (EC 2.6.1.11); 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) from Synechococcus sp.

40% id,
90% cov

PUUE_ECOLI / P50457: 4-aminobutyrate aminotransferase PuuE; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; Glutamate:succinic semialdehyde transaminase; EC 2.6.1.19 from Escherichia coli
GoaG / b1302: 4-aminobutyrate aminotransferase PuuE (EC 2.6.1.19; EC 2.6.1.48) from Escherichia coli
puuE / P50457: 4-aminobutyrate aminotransferase PuuE (EC 2.6.1.19; EC 2.6.1.48) from Escherichia coli

34% id,
90% cov

More...

PfGW456L13_3: Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18)
is similar to:
PaperBLAST

Sama_2643: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) from Shewanella amazonensis

37% id,
98% cov

AO353_08585: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) from Pseudomonas fluorescens

36% id,
96% cov

PS417_27130: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) from Pseudomonas simiae

35% id,
98% cov

More...

PfGW456L13_1044: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)
is similar to:
PaperBLAST

AO353_08585: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) from Pseudomonas fluorescens

32% id,
95% cov

AO356_13150: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) from Pseudomonas fluorescens

31% id,
95% cov

Sama_2643: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) from Shewanella amazonensis

31% id,
95% cov

More...

PfGW456L13_398: 4-aminobutyrate aminotransferase (EC 2.6.1.19)
is similar to:
PaperBLAST

Sama_2636: gamma-aminobutyrate transaminase (EC 2.6.1.19) from Shewanella amazonensis

31% id,
98% cov

B1XNF8: acetylornithine transaminase (EC 2.6.1.11); 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) from Synechococcus sp.

30% id,
98% cov

gabT / Q4KKA1: 4-aminobutyrate transaminase subunit (EC 2.6.1.19) from Pseudomonas fluorescens

29% id,
99% cov

More...

PfGW456L13_3745: Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18)
is similar to:
PaperBLAST

GABT_ECOLI / P22256: 4-aminobutyrate aminotransferase GabT; 5-aminovalerate transaminase; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; Glutamate:succinic semialdehyde transaminase; L-AIBAT; EC 2.6.1.19; EC 2.6.1.48 from Escherichia coli
GabT / b2662: 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.48; EC 2.6.1.11) from Escherichia coli
gabT / P22256: 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.48; EC 2.6.1.11) from Escherichia coli

31% id,
98% cov

A0A5B8KQ12: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) from Agrobacterium tumefaciens

32% id,
93% cov

A0A0U4XQS6: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 5-aminovalerate transaminase (EC 2.6.1.48) from Corynebacterium glutamicum

31% id,
90% cov

More...

PfGW456L13_1383: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)
is similar to:
PaperBLAST

gabT / Q4KKA1: 4-aminobutyrate transaminase subunit (EC 2.6.1.19) from Pseudomonas fluorescens

31% id,
94% cov

A0A5B8KQ12: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) from Agrobacterium tumefaciens

33% id,
80% cov

GABT_ECOLI / P22256: 4-aminobutyrate aminotransferase GabT; 5-aminovalerate transaminase; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; Glutamate:succinic semialdehyde transaminase; L-AIBAT; EC 2.6.1.19; EC 2.6.1.48 from Escherichia coli
GabT / b2662: 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.48; EC 2.6.1.11) from Escherichia coli
gabT / P22256: 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.48; EC 2.6.1.11) from Escherichia coli

32% id,
80% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 14 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory