Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 16 curated entries in PaperBLAST's database that match '2.7.1.12' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_1926: Gluconokinase (EC 2.7.1.12)
is similar to:
PaperBLAST

Q8NMT0: gluconokinase (EC 2.7.1.12) from Corynebacterium glutamicum

44% id,
93% cov

GCNK_GLUOX / Q5FQ97: Gluconokinase; Gluconate kinase; EC 2.7.1.12 from Gluconobacter oxydans

47% id,
83% cov

BPHYT_RS16720: Gluconokinase (EC 2.7.1.12) from Burkholderia phytofirmans

40% id,
92% cov

More...

PfGW456L13_2179: Cytidylate kinase (EC 2.7.4.25)
is similar to:
PaperBLAST

IDNK / Q5T6J7: gluconokinase monomer (EC 2.7.1.12) from Homo sapiens
Q5T6J7: gluconokinase (EC 2.7.1.12) from Homo sapiens

30% id,
42% cov

PfGW456L13_4100: Serine/threonine protein kinase (EC 2.7.11.1)
is similar to:
PaperBLAST

Q29502: gluconokinase (EC 2.7.1.12) from Oryctolagus cuniculus

27% id,
37% cov

Q61036: gluconokinase (EC 2.7.1.12); non-specific serine/threonine protein kinase (EC 2.7.11.1) from Mus musculus

29% id,
30% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory