Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 25 curated entries in PaperBLAST's database that match '2.7.1.17' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_3037: Xylulose kinase (EC 2.7.1.17)
is similar to:
PaperBLAST

AO356_27695: Xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens

82% id,
100% cov

Pf6N2E2_805: Xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens

81% id,
100% cov

BWI76_RS27020: Xylulose kinase (EC 2.7.1.17) from Klebsiella michiganensis

34% id,
99% cov

More...

PfGW456L13_5128: Glycerol kinase (EC 2.7.1.30)
is similar to:
PaperBLAST

PGA1_c14010: Xylulose kinase (EC 2.7.1.17) from Phaeobacter inhibens

29% id,
97% cov

Q9WXX1: xylulokinase (EC 2.7.1.17) from Thermotoga maritima

28% id,
99% cov

Pf6N2E2_805: Xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens

27% id,
99% cov

More...

PfGW456L13_1734: Glycerol kinase (EC 2.7.1.30)
is similar to:
PaperBLAST

XYLB_LEVBR / P35850: Xylulose kinase; Xylulokinase; EC 2.7.1.17 from Levilactobacillus brevis

24% id,
97% cov

PGA1_c14010: Xylulose kinase (EC 2.7.1.17) from Phaeobacter inhibens

23% id,
90% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory