Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 36 curated entries in PaperBLAST's database that match '2.7.1.30'.

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_1734: Glycerol kinase (EC 2.7.1.30)
is similar to:
PaperBLAST

PS417_05575: Glycerol kinase (EC 2.7.1.30) from Pseudomonas simiae

96% id,
100% cov

GLPK_ECOLI / P0A6F3: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Escherichia coli
GlpK / b3926: glycerol kinase (EC 2.7.1.30) from Escherichia coli
glpK: glycerol kinase; EC 2.7.1.30 from Escherichia coli
glpK / P0A6F3: glycerol kinase (EC 2.7.1.30) from Escherichia coli

74% id,
100% cov

A6TFR2: glycerol kinase (EC 2.7.1.30) from Klebsiella pneumoniae

73% id,
100% cov

More...

PfGW456L13_5128: Glycerol kinase (EC 2.7.1.30)
is similar to:
PaperBLAST

GLPK_THEKO / O93623: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermococcus kodakarensis
O93623: glycerol kinase (EC 2.7.1.30) from Thermococcus kodakarensis

28% id,
95% cov

Dshi_3420: Glycerol kinase (EC 2.7.1.30) from Dinoroseobacter shibae

27% id,
92% cov

PS417_05575: Glycerol kinase (EC 2.7.1.30) from Pseudomonas simiae

25% id,
96% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory