Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 53 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 16 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_3036: Fructokinase (EC 2.7.1.4)
is similar to:
PaperBLAST

PfGW456L13_3036: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

100% id,
100% cov

AO353_25910: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

83% id,
100% cov

Dshi_2797: Fructokinase (EC 2.7.1.4) from Dinoroseobacter shibae

36% id,
99% cov

More...

PfGW456L13_1812: Enoyl-CoA hydratase (EC 4.2.1.17)
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

45% id,
97% cov

PfGW456L13_2412: Enoyl-CoA hydratase (EC 4.2.1.17)
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

43% id,
96% cov

PfGW456L13_3210: Enoyl-CoA hydratase (EC 4.2.1.17)
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

34% id,
96% cov

PfGW456L13_2433: Phenylacetate degradation enoyl-CoA hydratase PaaB (EC 4.2.1.17)
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

32% id,
98% cov

PfGW456L13_2434: Phenylacetate degradation enoyl-CoA hydratase PaaA (EC 4.2.1.17)
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

32% id,
96% cov

PfGW456L13_2950: 2-ketogluconate kinase (EC 2.7.1.13)
is similar to:
PaperBLAST

cscK / GB|CAA57218.2: fructokinase; EC 2.7.1.4 from Escherichia coli

34% id,
91% cov

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

30% id,
99% cov

SCRK1_ORYSJ / Q0JGZ6: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

30% id,
99% cov

More...

PfGW456L13_3388: Enoyl-CoA hydratase (EC 4.2.1.17)
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

31% id,
98% cov

PfGW456L13_3908: Ribokinase (EC 2.7.1.15)
is similar to:
PaperBLAST

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

30% id,
99% cov

scrK / GB|AAA08602.1: fructokinase; EC 2.7.1.4 from Salmonella enterica

28% id,
99% cov

A0A0H3AER7: fructokinase (EC 2.7.1.4) from Vibrio cholerae

28% id,
94% cov

More...

PfGW456L13_2984: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

28% id,
98% cov

PfGW456L13_2285: Isohexenylglutaconyl-CoA hydratase
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

28% id,
98% cov

PfGW456L13_3244: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

23% id,
96% cov

PfGW456L13_4041: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

23% id,
98% cov

PfGW456L13_2869: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
is similar to:
PaperBLAST

C4M2I2: fructokinase (EC 2.7.1.4) from Entamoeba histolytica

27% id,
60% cov

PfGW456L13_5074: 1-phosphofructokinase (EC 2.7.1.56)
is similar to:
PaperBLAST

BPHYT_RS02045: Fructokinase (EC 2.7.1.4) from Burkholderia phytofirmans

28% id,
55% cov

PfGW456L13_195: ADP-heptose synthase (EC 2.7.-.-) / D-glycero-beta-D-manno-heptose 7-phosphate kinase
is similar to:
PaperBLAST

N515DRAFT_1919: Fructokinase (EC 2.7.1.4) from Dyella japonica

28% id,
35% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 17 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory