Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 46 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 39 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_3036: Fructokinase (EC 2.7.1.4)
is similar to:
PaperBLAST

PfGW456L13_3036: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

100% id,
100% cov

AO353_25910: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

83% id,
100% cov

Dshi_2797: Fructokinase (EC 2.7.1.4) from Dinoroseobacter shibae

36% id,
99% cov

More...

PfGW456L13_2950: 2-ketogluconate kinase (EC 2.7.1.13)
is similar to:
PaperBLAST

cscK / GB|CAA57218.2: fructokinase; EC 2.7.1.4 from Escherichia coli

34% id,
91% cov

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

30% id,
99% cov

SCRK1_ORYSJ / Q0JGZ6: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

30% id,
99% cov

More...

PfGW456L13_3908: Ribokinase (EC 2.7.1.15)
is similar to:
PaperBLAST

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

30% id,
99% cov

scrK / GB|AAA08602.1: fructokinase; EC 2.7.1.4 from Salmonella enterica

28% id,
99% cov

N515DRAFT_1919: Fructokinase (EC 2.7.1.4) from Dyella japonica

28% id,
90% cov

More...

PfGW456L13_2869: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
is similar to:
PaperBLAST

C4M2I2: fructokinase (EC 2.7.1.4) from Entamoeba histolytica

27% id,
60% cov

PfGW456L13_5074: 1-phosphofructokinase (EC 2.7.1.56)
is similar to:
PaperBLAST

BPHYT_RS02045: Fructokinase (EC 2.7.1.4) from Burkholderia phytofirmans

28% id,
55% cov

PfGW456L13_195: ADP-heptose synthase (EC 2.7.-.-) / D-glycero-beta-D-manno-heptose 7-phosphate kinase
is similar to:
PaperBLAST

N515DRAFT_1919: Fructokinase (EC 2.7.1.4) from Dyella japonica

28% id,
35% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory