Curated BLAST for Genomes


Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 20 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_1472: Glutamate 5-kinase (EC / RNA-binding C-terminal domain PUA
is similar to:

PROB_ECOLI / P0A7B5: Glutamate 5-kinase; Gamma-glutamyl kinase; GK; EC from Escherichia coli
ProB / b0242: glutamate 5-kinase (EC from Escherichia coli
proB: glutamate 5-kinase; EC from Escherichia coli
proB / P0A7B5: glutamate 5-kinase (EC from Escherichia coli
P0A7B5: glutamate 5-kinase (EC from Escherichia coli

44% id,
99% cov

Ga0059261_3512: glutamate 5-kinase (EC from Sphingomonas koreensis

44% id,
97% cov

Q6E235: glutamate 5-kinase (EC from Bacillus subtilis

40% id,
97% cov


PfGW456L13_1981: Aspartokinase (EC
is similar to:

proB: glutamate 5-kinase; EC from Campylobacter jejuni

22% id,
100% cov

PfGW456L13_1356: Gamma-glutamyl phosphate reductase (EC
is similar to:

P5CS1 / P54887: δ1-pyrroline-5-carboxylate synthetase (EC; EC from Arabidopsis thaliana

37% id,
56% cov

P5CS1_ORYSJ / O04226: Delta-1-pyrroline-5-carboxylate synthase 1; OsP5CS1; EC; EC from Oryza sativa

35% id,
57% cov

P5CS2_ORYSJ / Q941T1: Delta-1-pyrroline-5-carboxylate synthase 2; OsP5CS2; EC; EC from Oryza sativa

34% id,
54% cov


PfGW456L13_793: Acetylglutamate kinase (EC
is similar to:

CA265_RS20855: glutamate 5-kinase (EC from Pedobacter sp.

21% id,
66% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory