Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)
Found 6 curated entries in PaperBLAST's database that match '2.8.3.13'.
These curated entries have 5 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query
| PfGW456L13_553: L-carnitine dehydratase/bile acid-inducible protein F is similar to: | PaperBLAST |
AO356_10845: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas fluorescens | 93% id, 100% cov |
gcdG / Q88RH1: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas putida | 87% id, 100% cov |
caiB / Q7CXU0: succinate—lglutarate CoA-transferase (EC 2.8.3.13) from Agrobacterium fabrum | 56% id, 97% cov |
| PfGW456L13_3635: L-carnitine dehydratase/bile acid-inducible protein F is similar to: | PaperBLAST |
AO356_10845: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas fluorescens | 42% id, 100% cov |
gcdG / Q88RH1: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas putida | 41% id, 100% cov |
caiB / Q7CXU0: succinate—lglutarate CoA-transferase (EC 2.8.3.13) from Agrobacterium fabrum | 41% id, 95% cov |
| PfGW456L13_1728: L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16) is similar to: | PaperBLAST |
caiB / Q7CXU0: succinate—lglutarate CoA-transferase (EC 2.8.3.13) from Agrobacterium fabrum | 36% id, 97% cov |
gcdG / Q88RH1: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas putida | 35% id, 99% cov |
AO356_10845: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas fluorescens | 35% id, 99% cov |
| PfGW456L13_4548: L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16) is similar to: | PaperBLAST |
gcdG / Q88RH1: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas putida | 35% id, 99% cov |
AO356_10845: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas fluorescens | 35% id, 99% cov |
caiB / Q7CXU0: succinate—lglutarate CoA-transferase (EC 2.8.3.13) from Agrobacterium fabrum | 35% id, 96% cov |
| PfGW456L13_2017: Alpha-methylacyl-CoA racemase (EC 5.1.99.4) is similar to: | PaperBLAST |
gcdG / Q88RH1: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas putida | 35% id, 100% cov |
caiB / Q7CXU0: succinate—lglutarate CoA-transferase (EC 2.8.3.13) from Agrobacterium fabrum | 35% id, 97% cov |
SUCHY_HUMAN / Q9HAC7: Succinate--hydroxymethylglutarate CoA-transferase; Dermal papilla-derived protein 13; SuccinylCoA:glutarate-CoA transferase; EC 2.8.3.13 from Homo sapiens | 31% id, 90% cov |
| PfGW456L13_3462: CAIB/BAIF family protein is similar to: | PaperBLAST |
gcdG / Q88RH1: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas putida | 30% id, 99% cov |
gcdG / Q88RH1: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas putida | 23% id, 95% cov |
caiB / Q7CXU0: succinate—lglutarate CoA-transferase (EC 2.8.3.13) from Agrobacterium fabrum | 35% id, 52% cov |
| PfGW456L13_1878: CoA transferase, CAIB/BAIF family is similar to: | PaperBLAST |
SUCHY_HUMAN / Q9HAC7: Succinate--hydroxymethylglutarate CoA-transferase; Dermal papilla-derived protein 13; SuccinylCoA:glutarate-CoA transferase; EC 2.8.3.13 from Homo sapiens | 27% id, 58% cov |
SUGCT / Q9HAC7: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Homo sapiens | 27% id, 57% cov |
caiB / Q7CXU0: succinate—lglutarate CoA-transferase (EC 2.8.3.13) from Agrobacterium fabrum | 31% id, 51% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory