Curated BLAST
Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)
Found 12 curated entries in PaperBLAST's database that match '3.1.1.15' as complete word(s).
These curated entries have 11 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query
PfGW456L13_2118: L-arabinolactonase (EC 3.1.1.15)
is similar to: | PaperBLAST |
PfGW456L13_2118: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas fluorescens | 100% id,
100% cov |
AO356_20235: L-arabinolactonase (EC 3.1.1.15) / D-galactonolactonase (EC 3.1.1.25) from Pseudomonas fluorescens | 83% id,
100% cov |
Pf6N2E2_5966: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas fluorescens | 82% id,
100% cov |
Pf1N1B4_413: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas fluorescens | 86% id,
93% cov |
PS417_11020: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas simiae | 77% id,
100% cov |
HSERO_RS05225: L-arabinolactonase (EC 3.1.1.15) from Herbaspirillum seropedicae | 32% id,
98% cov |
ARALA_AZOBR / Q1JUP5: L-arabinolactonase; EC 3.1.1.15 from Azospirillum brasilense | 31% id,
95% cov |
Ac3H11_615: L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) from Acidovorax sp. | 33% id,
89% cov |
Shewana3_2088: L-arabinolactonase (EC 3.1.1.15) from Shewanella sp. | 34% id,
85% cov |
XACC_HALVD / D4GP31: Pentonolactonase XacC; L-arabinonolactonase; Xylono-1,4-lactonase; EC 3.1.1.15; EC 3.1.1.68 from Haloferax volcanii
xacC / D4GP31: D-xylono/L-arabinono-1,4-lactonase (EC 3.1.1.15; EC 3.1.1.68) from Haloferax volcanii | 31% id,
86% cov |
SMc00883: L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) from Sinorhizobium meliloti | 29% id,
92% cov |
More... |
PfGW456L13_3471: Transcriptional regulator, IclR family
is similar to: | PaperBLAST |
PfGW456L13_2118: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas fluorescens | 26% id,
93% cov |
HSERO_RS05225: L-arabinolactonase (EC 3.1.1.15) from Herbaspirillum seropedicae | 27% id,
90% cov |
Ac3H11_615: L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) from Acidovorax sp. | 27% id,
86% cov |
ARALA_AZOBR / Q1JUP5: L-arabinolactonase; EC 3.1.1.15 from Azospirillum brasilense | 26% id,
89% cov |
XACC_HALVD / D4GP31: Pentonolactonase XacC; L-arabinonolactonase; Xylono-1,4-lactonase; EC 3.1.1.15; EC 3.1.1.68 from Haloferax volcanii
xacC / D4GP31: D-xylono/L-arabinono-1,4-lactonase (EC 3.1.1.15; EC 3.1.1.68) from Haloferax volcanii | 25% id,
86% cov |
Pf1N1B4_413: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas fluorescens | 35% id,
41% cov |
PS417_11020: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas simiae | 30% id,
47% cov |
Shewana3_2088: L-arabinolactonase (EC 3.1.1.15) from Shewanella sp. | 31% id,
45% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory