Curated BLAST for Genomes


Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 17 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_3254: Trehalose synthase (EC
is similar to:

TREC_ECOLI / P28904: Trehalose-6-phosphate hydrolase; Alpha,alpha-phosphotrehalase; EC from Escherichia coli
TreE / b4239: trehalose-6-phosphate hydrolase (EC from Escherichia coli
AAC77196.1: trehalose-6-phosphate hydrolase (TreC) (EC
treC / P28904: trehalose-6-phosphate hydrolase (EC from Escherichia coli

31% id,
92% cov

BAB38639.1: trehalose 6-P hydrolase (ECs5216) (EC

31% id,
92% cov

TREC_BACSU / P39795: Trehalose-6-phosphate hydrolase; Alpha,alpha-phosphotrehalase; Phospho-alpha-(1-1)-glucosidase; EC from Bacillus subtilis
CAB12610.1: trehalose-6-phosphate hydrolase (TreA;BSU07810) (EC
treA / P39795: trehalose-6-phosphate hydrolase (EC from Bacillus subtilis

37% id,
58% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory