Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 36 curated entries in PaperBLAST's database that match '3.5.1.25' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_4830: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
is similar to:
PaperBLAST

PfGW456L13_4830: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Pseudomonas fluorescens

100% id,
100% cov

AO353_04450: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Pseudomonas fluorescens

95% id,
100% cov

AO356_17550: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Pseudomonas fluorescens

91% id,
100% cov

More...

PfGW456L13_2678: Exoenzymes regulatory protein AepA precursor
is similar to:
PaperBLAST

Sama_0946: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella amazonensis

31% id,
32% cov

PfGW456L13_5133: N-acyl-D-amino-acid deacylase (EC 3.5.1.81)
is similar to:
PaperBLAST

Q8Y8E8: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Listeria monocytogenes

34% id,
24% cov

NAGA_LYSSH / Q84F86: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Lysinibacillus sphaericus

32% id,
15% cov

PfGW456L13_2172: S-adenosylhomocysteine deaminase (EC 3.5.4.28); Methylthioadenosine deaminase
is similar to:
PaperBLAST

Sama_0946: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella amazonensis

42% id,
18% cov

NAGA_ECO57 / P0AF19: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Escherichia coli
NAGA_ECOLI / P0AF18: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Escherichia coli
NagA / b0677: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Escherichia coli
AAG54999.1: EDL933_0745 (EC 3.5.1.25)
AAC73771.1: N-acetylglucosamine 6-phosphate deacetylase (NagA;b0677) (EC 3.5.1.25)
BAB34130.1: ECs0707 (EC 3.5.1.25)
nagA / P0AF18: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Escherichia coli

36% id,
18% cov

AAN79225.1: c0752 (NagA) (EC 3.5.1.25)

36% id,
18% cov

PfGW456L13_4087: Guanine deaminase (EC 3.5.4.3)
is similar to:
PaperBLAST

nagA / A3CQ16: N-acetylglucosamine-6-phosphate deacetylase subunit (EC 3.5.1.25) from Streptococcus sanguinis

31% id,
15% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory