Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 20 curated entries in PaperBLAST's database that match '3.5.3.11' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_4435: Agmatinase (EC 3.5.3.11) is similar to:	PaperBLAST
SPEB_HUMAN / Q9BSE5: Agmatinase, mitochondrial; Agmatine ureohydrolase; AUH; EC 3.5.3.11 from Homo sapiens AGMAT / Q9BSE5: agmatinase (EC 3.5.3.11) from Homo sapiens Q9BSE5: agmatinase (EC 3.5.3.11) from Homo sapiens	62% id, 89% cov
W5PHZ9: agmatinase (EC 3.5.3.11) from Ovis aries	64% id, 86% cov
SPEB_MOUSE / A2AS89: Agmatinase, mitochondrial; Agmatine ureohydrolase; AUH; EC 3.5.3.11 from Mus musculus	61% id, 84% cov
SPEB_PROMI / Q7X3P1: Agmatinase; Agmatine ureohydrolase; AUH; EC 3.5.3.11 from Proteus mirabilis	42% id, 91% cov
SPEB_ECOLI / P60651: Agmatinase; Agmatine ureohydrolase; AUH; EC 3.5.3.11 from Escherichia coli SpeB / b2937: agmatinase (EC 3.5.3.11) from Escherichia coli speB / RF\|NP_417412: agmatinase; EC 3.5.3.11 from Escherichia coli speB / P60651: agmatinase (EC 3.5.3.11) from Escherichia coli	42% id, 92% cov
speB / P70999: agmatinase (EC 3.5.3.11) from Bacillus subtilis	37% id, 91% cov
D4GWG4: agmatinase (EC 3.5.3.11) from Haloferax volcanii	34% id, 93% cov
AGMT_PYRHO / O57839: Agmatinase; EC 3.5.3.11 from Pyrococcus horikoshii	31% id, 95% cov
ARGI_MEDTR / G7JFU5: Arginase, mitochondrial; Agmatinase ARGAH; Arginine amidohydrolase; MtARGAH; EC 3.5.3.1; EC 3.5.3.11 from Medicago truncatula	33% id, 84% cov
ARGI1_ARATH / P46637: Arginase 1, mitochondrial; Agmatinase ARGAH1; Arginine amidohydrolase 1; AtARGAH1; EC 3.5.3.1; EC 3.5.3.11 from Arabidopsis thaliana	33% id, 83% cov
SPEBH_THEKO / Q5JI38: N(1)-aminopropylagmatine ureohydrolase; Agmatinase; Protein SpeB homolog; EC 3.5.3.24; EC 3.5.3.11 from Thermococcus kodakarensis	30% id, 89% cov
ARGI2_ARATH / Q9ZPF5: Arginase 2, chloroplastic/mitochondrial; Agmatinase ARGAH2; Arginine amidohydrolase 2; EC 3.5.3.1; EC 3.5.3.11 from Arabidopsis thaliana	32% id, 83% cov
SPEB_METJA / Q57757: Agmatinase; EC 3.5.3.11 from Methanocaldococcus jannaschii Q57757: agmatinase (EC 3.5.3.11) from Methanocaldococcus jannaschii	27% id, 92% cov
Q8YUM9: agmatinase (EC 3.5.3.11) from Anabaena sp.	29% id, 54% cov
More...

PfGW456L13_2989: Agmatinase (EC 3.5.3.11) is similar to:	PaperBLAST
SPEB_PROMI / Q7X3P1: Agmatinase; Agmatine ureohydrolase; AUH; EC 3.5.3.11 from Proteus mirabilis	56% id, 90% cov
SPEB_ECOLI / P60651: Agmatinase; Agmatine ureohydrolase; AUH; EC 3.5.3.11 from Escherichia coli SpeB / b2937: agmatinase (EC 3.5.3.11) from Escherichia coli speB / RF\|NP_417412: agmatinase; EC 3.5.3.11 from Escherichia coli speB / P60651: agmatinase (EC 3.5.3.11) from Escherichia coli	55% id, 90% cov
SPEB_HUMAN / Q9BSE5: Agmatinase, mitochondrial; Agmatine ureohydrolase; AUH; EC 3.5.3.11 from Homo sapiens AGMAT / Q9BSE5: agmatinase (EC 3.5.3.11) from Homo sapiens Q9BSE5: agmatinase (EC 3.5.3.11) from Homo sapiens	45% id, 83% cov
W5PHZ9: agmatinase (EC 3.5.3.11) from Ovis aries	46% id, 81% cov
SPEB_MOUSE / A2AS89: Agmatinase, mitochondrial; Agmatine ureohydrolase; AUH; EC 3.5.3.11 from Mus musculus	42% id, 81% cov
speB / P70999: agmatinase (EC 3.5.3.11) from Bacillus subtilis	36% id, 91% cov
SPEB_METJA / Q57757: Agmatinase; EC 3.5.3.11 from Methanocaldococcus jannaschii Q57757: agmatinase (EC 3.5.3.11) from Methanocaldococcus jannaschii	32% id, 99% cov
D4GWG4: agmatinase (EC 3.5.3.11) from Haloferax volcanii	32% id, 97% cov
ARGI_MEDTR / G7JFU5: Arginase, mitochondrial; Agmatinase ARGAH; Arginine amidohydrolase; MtARGAH; EC 3.5.3.1; EC 3.5.3.11 from Medicago truncatula	32% id, 88% cov
AGMT_PYRHO / O57839: Agmatinase; EC 3.5.3.11 from Pyrococcus horikoshii	30% id, 94% cov
SPEBH_THEKO / Q5JI38: N(1)-aminopropylagmatine ureohydrolase; Agmatinase; Protein SpeB homolog; EC 3.5.3.24; EC 3.5.3.11 from Thermococcus kodakarensis	30% id, 86% cov
ARGI1_ARATH / P46637: Arginase 1, mitochondrial; Agmatinase ARGAH1; Arginine amidohydrolase 1; AtARGAH1; EC 3.5.3.1; EC 3.5.3.11 from Arabidopsis thaliana	30% id, 82% cov
ARGI2_ARATH / Q9ZPF5: Arginase 2, chloroplastic/mitochondrial; Agmatinase ARGAH2; Arginine amidohydrolase 2; EC 3.5.3.1; EC 3.5.3.11 from Arabidopsis thaliana	35% id, 53% cov
Q8YUM9: agmatinase (EC 3.5.3.11) from Anabaena sp.	28% id, 63% cov
More...

PfGW456L13_2689: Agmatinase (EC 3.5.3.11) is similar to:	PaperBLAST
speB / P70999: agmatinase (EC 3.5.3.11) from Bacillus subtilis	35% id, 94% cov
AGMT_PYRHO / O57839: Agmatinase; EC 3.5.3.11 from Pyrococcus horikoshii	34% id, 93% cov
SPEBH_THEKO / Q5JI38: N(1)-aminopropylagmatine ureohydrolase; Agmatinase; Protein SpeB homolog; EC 3.5.3.24; EC 3.5.3.11 from Thermococcus kodakarensis	32% id, 95% cov
SPEB_ECOLI / P60651: Agmatinase; Agmatine ureohydrolase; AUH; EC 3.5.3.11 from Escherichia coli SpeB / b2937: agmatinase (EC 3.5.3.11) from Escherichia coli speB / RF\|NP_417412: agmatinase; EC 3.5.3.11 from Escherichia coli speB / P60651: agmatinase (EC 3.5.3.11) from Escherichia coli	33% id, 90% cov
SPEB_HUMAN / Q9BSE5: Agmatinase, mitochondrial; Agmatine ureohydrolase; AUH; EC 3.5.3.11 from Homo sapiens AGMAT / Q9BSE5: agmatinase (EC 3.5.3.11) from Homo sapiens Q9BSE5: agmatinase (EC 3.5.3.11) from Homo sapiens	36% id, 82% cov
W5PHZ9: agmatinase (EC 3.5.3.11) from Ovis aries	36% id, 80% cov
SPEB_MOUSE / A2AS89: Agmatinase, mitochondrial; Agmatine ureohydrolase; AUH; EC 3.5.3.11 from Mus musculus	34% id, 81% cov
ARGI_MEDTR / G7JFU5: Arginase, mitochondrial; Agmatinase ARGAH; Arginine amidohydrolase; MtARGAH; EC 3.5.3.1; EC 3.5.3.11 from Medicago truncatula	31% id, 87% cov
ARGI1_ARATH / P46637: Arginase 1, mitochondrial; Agmatinase ARGAH1; Arginine amidohydrolase 1; AtARGAH1; EC 3.5.3.1; EC 3.5.3.11 from Arabidopsis thaliana	32% id, 79% cov
ARGI2_ARATH / Q9ZPF5: Arginase 2, chloroplastic/mitochondrial; Agmatinase ARGAH2; Arginine amidohydrolase 2; EC 3.5.3.1; EC 3.5.3.11 from Arabidopsis thaliana	30% id, 79% cov
Q8YUM9: agmatinase (EC 3.5.3.11) from Anabaena sp.	27% id, 51% cov
More...

PfGW456L13_2993: Agmatinase (EC 3.5.3.11) is similar to:	PaperBLAST
SPEB_ECOLI / P60651: Agmatinase; Agmatine ureohydrolase; AUH; EC 3.5.3.11 from Escherichia coli SpeB / b2937: agmatinase (EC 3.5.3.11) from Escherichia coli speB / RF\|NP_417412: agmatinase; EC 3.5.3.11 from Escherichia coli speB / P60651: agmatinase (EC 3.5.3.11) from Escherichia coli	64% id, 16% cov
SPEB_PROMI / Q7X3P1: Agmatinase; Agmatine ureohydrolase; AUH; EC 3.5.3.11 from Proteus mirabilis	56% id, 16% cov
speB / P70999: agmatinase (EC 3.5.3.11) from Bacillus subtilis	40% id, 17% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory