Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 12 curated entries in PaperBLAST's database that match '3.5.3.13' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_330: Formiminoglutamic iminohydrolase (EC 3.5.3.13)
is similar to:
PaperBLAST

PfGW456L13_330: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens

100% id,
100% cov

Pf1N1B4_1591: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens

97% id,
100% cov

AO353_12235: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens

93% id,
100% cov

More...

PfGW456L13_13: Guanine deaminase (EC 3.5.4.3); Hydroxydechloroatrazine ethylaminohydrolase (EC 3.5.99.3)
is similar to:
PaperBLAST

HUTF_PSEAE / Q9HU77: Formimidoylglutamate deiminase; Formiminoglutamate deiminase; N-formimino-L-glutamate deiminase; N-formimino-L-glutamate iminohydrolase; EC 3.5.3.13 from Pseudomonas aeruginosa
Q9HU77: formimidoylglutamate deiminase (EC 3.5.3.13) from Pseudomonas aeruginosa

28% id,
96% cov

PfGW456L13_4087: Guanine deaminase (EC 3.5.4.3)
is similar to:
PaperBLAST

Ac3H11_2549: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Acidovorax sp.

27% id,
42% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory